Bradyrhizobium sp. ORS 285: BRAD285_0682
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Entry
BRAD285_0682 CDS
T04956
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bro
Bradyrhizobium sp. ORS 285
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bro03021
]
BRAD285_0682
Transcription machinery [BR:
bro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BRAD285_0682
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_2
TPR_1
TPR_14
TPR_21
TPR_9
Sigma70_r4
Sigma70_ECF
TPR_11
TPR_8
TPR_12
TPR_16
TAF6_C
TPR_10
Motif
Other DBs
NCBI-ProteinID:
SMX55967
UniProt:
A0A1Y6KB06
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Position
690551..691822
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AA seq
423 aa
AA seq
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MSDAAWIDAALTSARPQAVGALLRYFRDLDTAEEAFQNACLRALKSWPQNGPPRDPAAWL
IMVGRNAAIDDVRRTRREQPLPEDEAISDLGDAESAIADRLDGSHYRDDILRLLFICCHK
ELPATQQIALALRVVSGLTVKQIARAFLVSEAAMEQRITRAKARVAQADVPFETPGAVER
SERLLAVAAMIYLIFNEGYSASGETAALRQPLSEEAIRLARLLLRLFPGEPEIMGLTALL
LLQHARSAARFDAEGLPILLDDQDRTLWNQPLIAEGLALIDKAMRHRRSGPYQIQAAIAA
LHARAARPEETDWTQIDLLYGALEVVQPSPVVTLNRAVAVSKVRGAQAALDLIAPLEGRL
ANYFYFFGVRGALLMQLGRNDEARTAFDRAIALAHSSAEAAHIRMQLDRLMRDGATAQAR
AGQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgcggcctggatcgatgcggccctgacatcagcacgcccccaggccgtcggc
gcattgctgcgctactttcgcgacctcgacaccgcggaggaggcgttccagaacgcctgc
ctgcgcgcgctcaagagctggccgcagaacggcccgccgcgcgatcccgcggcgtggctg
atcatggtcggccgcaatgccgcgatcgacgatgtcaggcgcacccggcgcgagcagccg
ctgccggaggacgaagccatctccgatctcggcgatgccgagagcgcgatcgccgaccgg
ctcgacggctcgcattatcgcgacgacatcctgcggctgctgttcatctgctgccacaag
gagctccccgcgacgcagcagatcgcgctggcgctgcgcgtcgtgtccggcctgacggtc
aagcagatcgcccgcgccttcctggtcagcgaggcggccatggagcagcgcatcacccgc
gccaaggcgcgggtcgcacaggctgacgtgccgttcgagacgccgggcgcggtcgagcgc
tcggagcggctgctcgccgtcgccgcgatgatctatctgatcttcaacgagggctattcc
gccagcggcgagaccgccgcgctgcgccagccgctctccgaggaggcgatccggctggcg
cggctcctgctgcggctgtttccaggcgagccggagatcatggggctgacggccttgctg
ctgctccagcacgcccgcagcgcggcgcgcttcgatgccgaaggcttgccgatcctgctc
gacgatcaggaccgcacgctgtggaatcagccgctgatcgccgagggcctggcgctgatc
gacaaggcgatgcggcatcggcgcagcggcccgtaccagatccaggcggcgatcgcggcg
ctgcatgcgcgcgccgccaggcccgaggagaccgattggacccagatcgacctgttgtat
ggcgcgctcgaagtggtgcagccgtcgccggtggtgacgctcaacagggccgtcgcggtc
tccaaggtacgcggcgcccaggccgcgctcgacctgatcgcgccgctcgaagggcgcctt
gcgaactatttctatttcttcggcgtgcgcggcgcgctgttgatgcagctcgggcgcaat
gacgaggcgcggacggcgttcgatcgcgccatcgcgctggcgcacagctcggccgaggcg
gcccatatccgcatgcagctcgaccgcttgatgcgcgacggcgcaactgcgcaggccaga
gcagggcaatga
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