Brassica rapa (field mustard): 103830000
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Entry
103830000 CDS
T03449
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103830000
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103830000
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103830000
03036 Chromosome and associated proteins [BR:
brp03036
]
103830000
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103830000
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103830000
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103830000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF6724
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
103830000
NCBI-ProteinID:
XP_009103943
LinkDB
All DBs
Position
A07:complement(17778213..17780243)
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AA seq
489 aa
AA seq
DB search
MLNKIMKLGGKKFSKSDQDNTSGVNTVVRSSRPTTAAAPPSSTGESQSAAPSPSQTPNHP
MFTAPPSLEVLPLLKDVSSSDRPLLFMKKAHMCSCQCDFSDSLIMPREKEIKRQTLLELV
DFLHSSSGKVNETMQSELIRMVSANMFRCLPPAHYENTGAPPEGNDPEEEEPYLEPWWPH
LQLVYELLLRYVVSSEIEPKTAKKFINHTFVSRLLDLFDSEDPREREYLKTVLHRIYGKF
IFHRPFIRCSIYNIFYKYLYETERCVGIGELLEILGSVINGFTVPMREEHVLYLVKAILP
LHKSKGISIFHQQLSYCVVQFVEKDYKLADTVIRGLLKYWPLTNCNKEVLFLGELEEVLD
VTEPSEFQHCVVPLFRQIGKCLNSANFQVAERALFLWNNEHIVGLIAENKDMIFPIIFEA
LERNMKGHWNQAVHGLSENVRRMFMEMDNELFEECEKRHLENEAKACELLEQREMTWKRL
EEAASLAAN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatcatgaaactgggcgggaagaaattcagcaaatcagatcaagacaac
acctccggcgtcaacaccgtcgtccgcagcagccgccccacaaccgccgccgcgcctcca
tcgtcaaccggcgaatcacaatccgccgctccgtcgccttcgcagacaccaaaccaccca
atgttcacagcaccaccttccctcgaagtgcttccactgctaaaagacgtctcctcctcg
gatcgtcctctcctcttcatgaagaaggctcacatgtgctcttgccaatgcgacttctca
gactcactgatcatgccgcgcgagaaagagatcaagaggcagacgcttctcgagctcgtc
gacttcctccactcctcctcaggcaaagtgaacgagacgatgcagagcgagcttatacgc
atggtctcggcgaacatgttcaggtgtctcccgcccgcgcattacgagaacaccggagct
cctcctgaaggtaacgatcccgaggaggaggagccttatcttgagccatggtggcctcat
ctgcagcttgtttacgagcttctcctgcgttacgttgtgtcttccgagatagagcccaag
actgctaagaagttcatcaaccacacctttgtctcgaggctgctcgatctgttcgactcc
gaggatcctagggagagggagtacttgaaaactgtccttcacaggatctacgggaagttc
atcttccaccgtcctttcatcaggtgctccatttacaacatcttctacaagtacttgtat
gagactgagaggtgtgttggaatcggagagttgctggagattctcgggagtgtgatcaat
gggttcacagtaccgatgagagaggagcatgtactgtatcttgtgaaggccattttgccg
ctgcacaagtcgaaaggcatctccattttccaccagcagttgtcgtattgcgtggtgcag
tttgtggagaaagattacaagttggctgatactgtgatccgtgggctgttgaagtactgg
ccgcttacgaattgtaataaggaggttctgttcttgggagagcttgaagaggttttggat
gttacagagccttcagagtttcagcattgtgttgttcctctttttagacagattgggaag
tgtcttaacagcgcaaacttccaggttgcagagagagctcttttcttgtggaacaatgag
catatcgtaggcttgattgctgagaacaaagatatgatctttccgataatctttgaagcg
ttggagaggaacatgaaaggacattggaaccaagcggtgcatggtttgtctgagaacgtt
aggagaatgtttatggagatggacaatgagctgtttgaagagtgcgagaagcgacatctg
gagaacgaagctaaggcttgtgagttgttggaacaaagagagatgacatggaagagactt
gaagaggctgcttctttagctgcaaactga
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