Brassica rapa (field mustard): 103836748
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Entry
103836748 CDS
T03449
Name
(RefSeq) serine/arginine-rich-splicing factor SR34 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103836748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103836748
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
SR proteins
103836748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
103836748
NCBI-ProteinID:
XP_033134572
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All DBs
Position
A09:complement(1019934..1023032)
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AA seq
312 aa
AA seq
DB search
MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDPRDADD
AIHGRDGYDFDGHCLRVELAHGGRRSSNDARGSYGGGSRGGGGGRDGGDRGRGPSRRSEY
RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKKLDDT
EFRNAFSRGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRSRSRGRSHSRSLSRSRSRSPK
AKSSRRSPAKSTSRSPRSRSKSRTPPPRGSRSRSRSPPPPVQKEASKSPSKVSPAKSPMR
SRSKSRSRSPSR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgttcgagcagaactatctacgtcgggaaccttcccggagatatccgcgag
agagaagtcgaagatttgttcagtaagtatggacctgttgttcaaatcgatttgaagatc
ccaccaagacctcctggctacgccttcgtcgagtttgaggatcctcgggatgctgatgat
gcaattcacggtcgtgatggatatgacttcgatggccattgtttaagggtggagctagca
catggtgggaggcgttcgtctaatgatgcacgtggtagttacggtggtggtagtcgtggt
ggtggtggcggtcgtgatggtggtgaccgtggacgtgggccatctaggagatctgagtac
cgagttgttgtgtcaggtttgccttcatctgcttcatggcaagacctcaaggatcacatg
cgtaaaggaggagaagtctgtttctctcaagtgttccgtgatggcagaggtacaactgga
atcgttgattatacgagctacgaggacatgaaatatgcgatcaaaaagcttgatgacaca
gagtttcggaatgcgttttctcgtggatatgtccgggttagggaatatgattcgaggaag
gactcgagaagccctagccgtggaagatcttattctaagagccgtagccgtagccgtagt
cgcagccgtgggcgtagccacagccgcagtcttagccgcagcaggagcaggagtccaaag
gctaaatcttcacgtaggtcgcctgcaaaatcaacatcgagatctcctcgttcccgctct
aagtcaaggacaccacctccaagaggatctcgttcaaggtcaagatcccctccacctcct
gttcagaaggaagcaagtaagagccctagcaaggtgagtccagccaagagccctatgcgt
agcaggagcaagagcagaagcaggagtccatctcggtaa
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