Brassica rapa (field mustard): 103842486
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Entry
103842486 CDS
T03449
Name
(RefSeq) eukaryotic initiation factor 4A-1
KO
K03257
translation initiation factor 4A
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103842486
03012 Translation factors [BR:
brp03012
]
103842486
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103842486
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103842486
mRNA cycle factors
Stress granule specific factors
103842486
Translation factors [BR:
brp03012
]
Eukaryotic type
Initiation factors
eIF-4
103842486
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103842486
Exosomal proteins of bladder cancer cells
103842486
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
103842486
NCBI-ProteinID:
XP_009117360
UniProt:
M4DYC1
LinkDB
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Position
A01:25637373..25640073
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AA seq
412 aa
AA seq
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MAGSAPEGTQFDARQFDQKLNEVLEGQDEFFTSYDEVHDSFDVMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFAIVQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD
NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRG
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatccgcaccagaaggaacacagtttgatgctcgtcagttcgaccagaagttg
aacgaagttctcgagggacaagatgagttcttcacctcttacgacgaggttcacgacagc
ttcgacgtcatgggtctccaagagaatctcctcaggggcatctacgcttatggtttcgag
aagccatctgctatccagcaaagaggaatcgtcccgttctgcaaaggcctcgacgtgatc
caacaagcccaatccggaaccggcaaaaccgccaccttctgctccggcgtcctccagcag
ctggacttcgccatcgtccagtgccaagccctcgtcctcgctccaaccagagagctcgcc
cagcagatcgagaaggtcatgagggcactcggcgactacctcggcgtcaaggtccacgcc
tgcgtcggcgggaccagcgtccgcgaggaccagcgcatcctccaggccggcgtccacgtc
gtcgtcggcaccccggggcgtgtgttcgacatgctgaagaggcagtccctccgcgccgac
aacatcaagatgtttgttcttgatgaggctgacgagatgctctctcgcgggttcaaggac
cagatctacgacatcttccagcttctcccaccaaagatccaagtcggcgtgttctcggcg
accatgcccccggaggctctcgagatcacgaggaagttcatgagcaagccggtgaggatc
ctggtgaagcgcgacgagctgaccttggaaggtatcaagcagttttacgtcaacgttgag
aaggaggattggaagctcgagacgctctgcgacctctacgagacgcttgccatcactcag
agcgtcatcttcgtgaacacgaggaggaaggtggactggctcaccgacaagatgaggggg
cgtgaccacactgtctcggctactcacggagacatggaccagaacacgagagacatcatc
atgagggagtttaggtctggctcctcgcgtgtgctcatcaccactgatctcttggctcgt
gggattgatgttcagcaggtgtctttggttatcaactacgatctgccgactcagcctgag
aactaccttcaccgtatcggaagaagtgggaggtttgggaggaaaggtgtggcgatcaac
tttgtgaccaaggatgatgagaggatgctgtttgatatccagaagttttacaacgttgtt
gttgaggagcttccttccaacgttgctgatctgctttga
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