KEGG   Brassica rapa (field mustard): 103842486
Entry
103842486         CDS       T03449                                 
Name
(RefSeq) eukaryotic initiation factor 4A-1
  KO
K03257  translation initiation factor 4A
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103842486
   03012 Translation factors [BR:brp03012]
    103842486
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103842486
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     103842486
   mRNA cycle factors
    Stress granule specific factors
     103842486
Translation factors [BR:brp03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    103842486
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103842486
  Exosomal proteins of bladder cancer cells
   103842486
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22 AAA_19 Flavi_DEAD
Other DBs
NCBI-GeneID: 103842486
NCBI-ProteinID: XP_009117360
UniProt: M4DYC1
LinkDB
Position
A01:25637373..25640073
AA seq 412 aa
MAGSAPEGTQFDARQFDQKLNEVLEGQDEFFTSYDEVHDSFDVMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFAIVQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD
NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRG
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggcaggatccgcaccagaaggaacacagtttgatgctcgtcagttcgaccagaagttg
aacgaagttctcgagggacaagatgagttcttcacctcttacgacgaggttcacgacagc
ttcgacgtcatgggtctccaagagaatctcctcaggggcatctacgcttatggtttcgag
aagccatctgctatccagcaaagaggaatcgtcccgttctgcaaaggcctcgacgtgatc
caacaagcccaatccggaaccggcaaaaccgccaccttctgctccggcgtcctccagcag
ctggacttcgccatcgtccagtgccaagccctcgtcctcgctccaaccagagagctcgcc
cagcagatcgagaaggtcatgagggcactcggcgactacctcggcgtcaaggtccacgcc
tgcgtcggcgggaccagcgtccgcgaggaccagcgcatcctccaggccggcgtccacgtc
gtcgtcggcaccccggggcgtgtgttcgacatgctgaagaggcagtccctccgcgccgac
aacatcaagatgtttgttcttgatgaggctgacgagatgctctctcgcgggttcaaggac
cagatctacgacatcttccagcttctcccaccaaagatccaagtcggcgtgttctcggcg
accatgcccccggaggctctcgagatcacgaggaagttcatgagcaagccggtgaggatc
ctggtgaagcgcgacgagctgaccttggaaggtatcaagcagttttacgtcaacgttgag
aaggaggattggaagctcgagacgctctgcgacctctacgagacgcttgccatcactcag
agcgtcatcttcgtgaacacgaggaggaaggtggactggctcaccgacaagatgaggggg
cgtgaccacactgtctcggctactcacggagacatggaccagaacacgagagacatcatc
atgagggagtttaggtctggctcctcgcgtgtgctcatcaccactgatctcttggctcgt
gggattgatgttcagcaggtgtctttggttatcaactacgatctgccgactcagcctgag
aactaccttcaccgtatcggaagaagtgggaggtttgggaggaaaggtgtggcgatcaac
tttgtgaccaaggatgatgagaggatgctgtttgatatccagaagttttacaacgttgtt
gttgaggagcttccttccaacgttgctgatctgctttga

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