Brassica rapa (field mustard): 103850230
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Entry
103850230 CDS
T03449
Name
(RefSeq) COP1-interactive protein 1 isoform X1
Organism
brp
Brassica rapa (field mustard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crescentin
AAA_13
ATG16
KIP1
Fez1
Mod_r
Tropomyosin
APG6_N
Filament
HMMR_N
TPR_MLP1_2
HOOK
Motif
Other DBs
NCBI-GeneID:
103850230
NCBI-ProteinID:
XP_009125197
UniProt:
M4EI91
LinkDB
All DBs
Position
A07:17115208..17122212
Genome browser
AA seq
1594 aa
AA seq
DB search
MRKHRFRETLKSFFEPHFDHEKDEMLKVTKSEIDEKVKKILGMVESGNIDEDKSKRQVVS
ELVNELHQEYQSLYDITGEIRKKVHEKGENSSSSSSDSDSDHSSRRETKKNGKVAKDDLK
QQIETADHEIANLKNKLTTSVEEKEAVDSELEAALVKLKESEEIISNLKFETEKLEGEKT
TALSDSRELLQKLEVAGRTETDLNQKLEDMKKERDQLQTEIDNGIKRFQEAEKIAEDWKT
TSDQLKDEATNFKQQLEAAEQRVSDLTRGMSSAEEENESLSLKVTEISGEIQQAQNTIQE
LTSELGEVKEKYKEKESQHSSLVELHETHEKESSSQVKDLEARVESSEKLIADLNQNLNN
AEEEKKLLSQRISEISNEIQEAQNTIKELMSESEQLKESHSVKEREIFGLRDIHETHQRE
SSTRTSELEAQLESSEKRVSDLSTNLKAAEEENKAISSKNVETLDKLEEAQKTINELMAE
LGELKDRHKEKESELSSLVEVHEAHQRDSTSRVKELVQVVESAEQQVADMKQSLNNAEEE
KKLLSQRISEISNEIQEAQNTIQELKSESGQLKESHGEKERELSGLRDMHETHQRESTTR
VSELEAQLESSEQRVSDMSASLKAAEEENKAISSKILETTDKLEQAQNTIQELIAELGEM
KERYKEKETEHSSLMELHETQLRESASHVKELEAQVESSEKLVADLNQSLNNAEEEKKLL
SQKISEISNEIQEAQNTIQELVSETEQLKESHDVKEREFSGLRDIHETHQRESSTRTSEL
EAQLKSSEQRVSELSASLNVAEEESKSMSSKILETTEELKQTQNKVQELMAELAESKDIH
IQKESELSSLVEVHEAHKRVSSSRVKELEELVESAEQRVKDLNQSLNSAEEEKKMLSQRI
SEMSNEIKQAENTIQELMSESGQLKESHSEKDKELLSLRDIHETHQRDSSTQLRDLEAQL
KSSEQRVSDLSESLKIAEEENKTMSTKISDTSGELERVQIMLQELTAESSKLKEHLAEKE
AELVHLKEKEIKSQLQIKELEATIATLELELQSVRARTVDLETEIVGKTTEIEQLEAQNR
EMVARISELGKTMDERGTELTALTQKLEDNEKHSSSTIESLTAEIDGLRGGLDSVSLQKE
ELEKLMESKGNEASMQIKGLMDEIDGLGQKVASLESQKAELEIQLERKSEESSEYMSQIK
NLKDEIISKVKDHDNILEERNGLSEKIKGLEVEIETLRKQRSELEEELRTKTEEIVQMRD
KINEASTETVALTEQINNLQDELDSLQVKKSETEAELDREKQEKSELSNQIIDVKRALEE
QETAYNTLGEEHKQISQLLKEREEILNKLAEDHKEAQRLLEQTGHEVTSRDSAIAGHEET
MESLRNELEMKGEEIETLMEKISNIEVKLRLSNQKLRVTEQVLTEKEEAFRREEARHIEE
QALLEKSLKVTHETYRGMIKEMAEKVNTTLDGFQSMSGKITEKQGKYEKTVMEASKLLWT
ATNWMIERNHEMEKMKKGMERKEEEIKKLGEKVREDEKEKETMKETLMGLGEEKREAIRQ
LCIWIDHHRGRCEYLEEILSKTVVARGQRQSQRA
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcatcggtttagagagaccttgaagtctttctttgagcctcattttgatcat
gagaaagatgaaatgcttaaagtaaccaaatctgaaattgatgaaaaggtgaagaaaatc
ttgggaatggttgagagtggaaacatcgatgaagataaatctaaacgacaagtggtttca
gagttagtgaatgaactccaccaggagtaccagtctctatatgatataacgggagagatt
aggaaaaaggtccacgagaaaggagaaaactcttcttcgtcgagctcagactcggattct
gaccattcttcgaggagggagaccaagaaaaatggaaaagtagcgaaagatgacttgaag
caacaaatcgaaactgcggatcatgagattgctaatctgaaaaataagttgacaacgagt
gttgaagaaaaagaagcagtagattccgagcttgaagcagctttggtgaagttaaaagaa
tcagaagagatcatcagcaatttgaaatttgaaactgagaagttagagggcgaaaagaca
acagctctgagtgatagcagagaactacttcagaaactggaagttgctggcagaacagaa
actgatctgaaccagaagttagaagatatgaaaaaagaaagagatcaactgcaaactgag
atagacaatggtatcaaaagatttcaagaagctgagaaaattgcagaagactggaaaaca
acgagtgatcaactcaaagatgaagctactaatttcaagcagcagctagaagcagcagaa
cagagagtttctgatctgacccgcggaatgagtagtgcagaggaagagaacgaatctcta
tccttgaaagttacggagatttcaggtgagatccaacaggcacagaacaccatacaagaa
ctcacttccgaattgggagaggtgaaagaaaaatacaaggaaaaagagagtcagcactct
agtttggtggagttacatgagacccatgagaaagaatcatccagtcaagtgaaagactta
gaagcacgagttgaatcatcagagaagttgattgcagatttgaaccaaaacctgaataat
gcagaggaagagaagaaactgctctctcaaagaatctcagaaatctctaacgagattcaa
gaggcgcagaacaccataaaagaactcatgtctgagtctgagcagttgaaagagagccac
agtgtgaaagagagagaaattttcggtttgagggacatccatgagactcatcagagagaa
tcatccacacgcacgagtgaattggaagctcaactggaatcctcagagaagcgggtctca
gatttgagtacaaatctaaaggctgcagaggaagaaaataaagctatctcctcgaaaaat
gttgaaactctagacaagctagaggaggcgcagaagacgataaatgaactcatggctgag
ttgggagagttgaaagaccgacacaaagagaaagagagtgagctttctagtctggtggag
gtacacgaagcacatcagagagattcaacaagccgagtaaaagaattagtacaagtggtg
gaatcagcggagcaacaggttgcagatatgaaacagagtttgaacaatgcagaggaagag
aagaaactgctctctcaaagaatctcagaaatctctaacgagattcaagaggcacaaaac
accatacaagaactcaagtcagagtctggacagttgaaagagagccacggtgagaaagag
agggaactttctggtttgagagatatgcacgagactcatcaaagagaatcaaccacacga
gtgagtgaattagaagctcaactagaatcatcagaacagcgcgtctcagatatgagtgcg
agtctgaaggctgcagaggaagaaaacaaagctatttcctcgaaaatattggaaactaca
gacaagctcgaacaggcacaaaacacaattcaagaactaatcgctgaattgggagagatg
aaagaaaggtacaaggaaaaggagactgagcattccagtttgatggagttacatgagacc
cagcttagagaatcagcgagtcatgtcaaagaattagaagctcaagtggaatcatcagag
aaattggttgcagatttgaaccaaagcctgaacaatgcagaggaagagaagaaactgctc
tctcagaaaatatcagaaatttccaacgagattcaagaggcgcagaacacgatacaagaa
ctcgtgtctgagactgaacagttgaaagagagccacgatgtgaaagaaagagaattttct
ggtttgagggacatccacgagactcatcagagagaatcatccacacgcacgagtgagtta
gaagctcaactgaaatcatcggaacagcgggtctcagagttgagtgcgagtctgaatgtt
gcagaggaagaaagcaaatccatgtcttccaagatcttggaaactacagaagagctcaaa
cagacgcagaacaaggtacaagaactaatggctgaattggcagagtcgaaagatatacac
atacaaaaagaaagtgagctttctagtttggtggaggtacacgaggcacataagagagtc
tcatcgagtcgagtgaaagaattagaagaactggtggaatcagcagagcaacgagttaaa
gatttgaaccagagcttgaacagtgctgaggaggagaagaaaatgttatctcagcgaatt
tcagaaatgtcgaatgagattaagcaggcggagaacaccatacaagaactcatgtctgag
tctggacagttaaaagagagccacagtgagaaagacaaggaacttctcagtttgagggat
atccatgagactcatcagagagattcatccactcaactgagagatttagaagcgcaactg
aagtcatctgaacaaagggtttctgatctgagtgaaagtctgaagattgcagaggaagaa
aacaaaaccatgtcgactaaaatctcagatacatcaggggagctcgaaagggtacagatc
atgttacaggaactcacagctgagtcaagcaaactgaaagagcatcttgctgagaaagaa
gcagaacttgtacatctgaaagagaaggaaatcaaatcacagttgcaaataaaagaacta
gaagcaacaatagcgacccttgagctggagctacagtcagttcgtgctcgtacagtagat
cttgagacagagattgtaggcaagaccactgaaattgagcaactggaagcgcaaaacaga
gaaatggttgctagaatctcggaacttgggaagacaatggacgagagaggtactgaactc
actgctttaacccaaaaacttgaggataacgagaagcattcatcgtccacaattgagagt
ttgacagctgagatcgatggcctacggggaggactagattcagtgtctcttcaaaaggag
gagttagagaaactaatggagagcaaaggcaatgaagcttcaatgcagattaagggtttg
atggatgagatcgatggtctgggccagaaagtggcgtcacttgaaagccagaaagcagaa
cttgagatccaacttgagaggaagtccgaagagagctctgaatatatgagtcagattaaa
aatctaaaagatgagatcataagcaaggtcaaagatcacgataatattctagaagagaga
aatggtttatctgagaagatcaagggtcttgaagttgagatagagactctacggaaacag
agaagtgagcttgaggaggagctaagaactaaaacagaagagattgttcaaatgcgcgat
aagattaacgaagcatcgactgaaacagttgccttaacagaacagatcaacaatctgcag
gatgaacttgattcactgcaggtgaagaagagtgagaccgaagcagagcttgatagagag
aagcaagagaaatcagaattgtctaatcagatcattgatgtcaaaagagcattggaagag
caagaaactgcttacaatacactgggagaggaacacaaacagatcagccaactgttaaaa
gaacgtgaggagatactaaataagctagcagaggatcacaaagaagcccaaagattgctg
gagcaaacaggtcatgaagtaacatccagagattcagcaatcgcaggtcatgaagaaacg
atggagagtttacgtaacgagctagaaatgaaaggagaggagatagaaactctcatggag
aaaatcagtaacatcgaggttaagcttcgtttatcgaaccagaaactgagggtaactgaa
caggtgttaacagagaaagaggaagctttcaggagagaagaagctaggcatatagaggaa
caagcattgcttgagaaaagccttaaggtgactcatgaaacatatcgaggtatgataaaa
gagatggctgagaaagtgaacacaacacttgatgggtttcaatcaatgtcgggaaaaatc
acggagaagcaagggaagtacgagaaaacggtaatggaggcatctaagttactgtggact
gctacgaattggatgatagagaggaatcacgagatggagaagatgaagaaagggatggag
aggaaagaagaggagataaagaagcttggagaaaaggtaagagaagatgaaaaggagaag
gagacaatgaaggagactttgatgggacttggagaagagaaaagagaagcaataaggcaa
ttatgtatttggattgatcaccatagaggtcgctgtgaatatcttgaagagattttgtct
aagaccgttgtggctcgagggcaaagacagtcgcagcgagcctaa
DBGET
integrated database retrieval system
