Brassica rapa (field mustard): 103852121
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Entry
103852121 CDS
T03449
Name
(RefSeq) protein HOTHEAD isoform X1
Organism
brp
Brassica rapa (field mustard)
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
Lycopene_cycl
Pyr_redox_2
FAD_binding_2
FAD_binding_3
Pyr_redox_3
Thi4
TrkA_N
HI0933_like
Motif
Other DBs
NCBI-GeneID:
103852121
NCBI-ProteinID:
XP_009127263
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Position
A02:8176959..8182431
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AA seq
586 aa
AA seq
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MSFPILWLFHIIFIIIFIISHVSCYPDQAGNYSFMKDATFAPTFARYDYIIIGGGTSGCA
LAATLSQNATVLVLERGGSPYENPTATDIQNFATTLSNTSPKSWSQLFVSEDGVYNTRAR
VLGGGSVLNAGFYTRAGDDYVKEAEWKSDEVEAAYEWVENKIAFEPPVMGWQTALKDGLL
EAGEFPYNGFTYNHTYGTKIGGTIFDNVGQRHTAANLLEYANPDTVAVYLHATVHKIVFT
TKGRPRPKAYGVIFQDENGVLHKAELAKNAMNEVILSAGAIGSPQLLMLSGVGPMAHLAA
HGIKPVVLDHPMVGQGMADNPMNAIFIPSPTPVEVSLIQAVGITKFDSYIEGASGVIFSY
SWTRNYFDGVLNYLNEIQTSHTTTSTPLSTQSITDFFKSIDPLFNATTQAGVILQKVAGP
VSRGHLELRNTNPYDNPSVRFNYYQEPEDLKKCVEGITTIIKVINSKAFSKFKYPEATIP
GLLDLILNVPTNLRPRHVTSVFNLKQFCIDTVMTIWHYHGGCQIGRVVDKNYKVLGIDGL
RVIDGSTFLKSPGTNPQATVMMLGRYMGQKILKEREAFLEKKEEEA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagttttccaatattatggctgtttcacataattttcatcataatattcatcatctcc
catgtttcgtgttatccagatcaagctgggaattatagttttatgaaggatgcaaccttc
gcaccaacgttcgctcgctacgattacatcatcatcggaggaggtacctccggttgcgcg
ttagccgcaacgctatctcaaaacgctaccgttttggtcctagaacgcggcggctcgcct
tacgaaaaccctacggcgacagatatccaaaacttcgctacaacactctcaaacacatct
cccaaatcgtggtcgcagctcttcgtctccgaagacggcgtttacaacacacgtgcgcgc
gtcctaggtggaggctccgtgctaaacgctggattctacacacgtgcgggggatgactac
gttaaggaggctgaatggaagagcgatgaagtcgaagctgcttatgagtgggttgagaat
aaaatagcgttcgaaccgccggttatgggatggcaaacggcgttaaaagacgggcttttg
gaggctggtgagtttccgtataatggtttcacgtacaatcatacctacgggaccaagatt
ggtggtacgatttttgataatgtcggtcagagacataccgctgcgaatctgttggagtac
gcaaatccggacacggttgctgtctatttgcacgctactgttcataagatcgtcttcacc
actaaaggaagaccaaggccaaaagcatacggagtgatatttcaagacgaaaatggagtg
ttacacaaggcagagcttgctaagaacgcaatgaacgaggtgattttgtctgcaggtgcc
attgggagcccgcagctgctgatgctgagcggtgtgggtcctatggctcatcttgcagct
cacgggattaaaccggtggtcttagatcatccaatggtcgggcaaggaatggcagataat
ccaatgaacgccatctttattccttcacctacgcctgtggaggtttctctaatacaagcc
gttgggatcacaaaatttgatagttacattgaaggagcaagtggcgtcatcttctcttat
agttggactcgtaattacttcgatggcgttttgaactatcttaacgagattcagacaagc
cataccactacatccacaccactctccactcaatccattacagattttttcaaatctata
gatccgttattcaatgcgaccacacaagccggtgtaatcctccagaaagtggcgggaccg
gtctcgagaggtcacttggagcttaggaacacaaacccatatgataatccttcagtgaga
tttaactactatcaagagccagaggatttgaagaaatgtgttgaagggattaccactatc
attaaagtgattaactcgaaggcattttccaaattcaagtacccggaggcgaccatacct
ggcttgcttgatctaatactgaacgttcccactaatctacggccgaggcacgtaacctcg
gtgtttaatttaaaacaattttgcatcgacactgtgatgactatttggcattaccatgga
ggttgccaaattggaagagtggtagacaagaattacaaagttttaggtattgatggttta
agggttatcgatggatcaacatttctcaagtctccaggcacaaatcctcaagctacggtt
atgatgcttggaaggtatatgggacaaaagattcttaaagagagggaagctttcctcgaa
aagaaagaagaagaagcatga
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