Brassica rapa (field mustard): 103856536
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Entry
103856536 CDS
T03449
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103856536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103856536
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103856536
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103856536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
FUSC-like
Motif
Other DBs
NCBI-GeneID:
103856536
NCBI-ProteinID:
XP_009131897
UniProt:
A0A397ZTL8
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All DBs
Position
A03:4533727..4536003
Genome browser
AA seq
292 aa
AA seq
DB search
MEMGFQENQQNQELTNLREIGSGHYGCSHYRRRCKIRAPCCDEVFDCRHCHNEAKDSLQT
EQLLRHDLPRHDVSKVICSLCETEQDVQQNCSSCGVCMGKYFCSKCKFFDDDLSKKQYHC
DECGICRTGGEENFFHCKRCRCCYSKVMEDKHRCVEGAMHHNCPVCFEYLFDSTRDITVL
RCGHTMHLQCTKDMGLHNRYTCPVCSKSICDMSNMWKKLDEEVAAYPMPKVYEDKMVWIL
CNDCGSNTNVRFHLIAHKCTSCGSYNTRQTQRGPDTTHSCSSGVPQVVGSTG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagatgggtttccaggaaaatcagcaaaaccaagaacttaccaatcttagggagatt
ggatctgggcattacgggtgctcacattatagaagacgatgcaagatcagagcaccttgt
tgcgatgaagttttcgattgcagacattgccacaacgaagctaaggactctcttcagact
gaacagcttcttagacatgatcttcctcggcatgatgtttcaaaggttatttgctcgctt
tgtgagacagaacaagacgtacagcagaactgctctagttgtggcgtatgtatggggaag
tacttttgctcaaaatgcaagttcttcgatgatgatctttccaagaagcaataccactgc
gatgaatgtgggatctgcaggaccggaggagaagaaaacttcttccattgcaaaagatgt
cgatgttgctactccaaggttatggaggacaagcaccgatgtgtggaaggcgcaatgcat
cacaattgtcccgtttgttttgagtatctgtttgattccacgagagatatcacggttttg
agatgtggtcacacaatgcatttacaatgcaccaaagatatggggttgcataaccgatac
acatgccctgtatgttctaaatccatatgtgacatgtccaacatgtggaagaaacttgac
gaagaggttgctgcctacccaatgccaaaagtgtacgaagacaagatggtatggattctt
tgcaatgactgtggttcaaacacgaatgttcggtttcatttgattgcgcataagtgcact
agctgcggttcatacaacactagacagacgcagagaggacctgatactactcactcttgc
tcttcaggagttcctcaggttgttggctcaaccggttaa
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