Brassica rapa (field mustard): 103856651
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Entry
103856651 CDS
T03449
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03020
RNA polymerase
brp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103856651
09124 Replication and repair
03420 Nucleotide excision repair
103856651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103856651
03019 Messenger RNA biogenesis [BR:
brp03019
]
103856651
03400 DNA repair and recombination proteins [BR:
brp03400
]
103856651
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
103856651
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103856651
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103856651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
103856651
NCBI-ProteinID:
XP_009132015
UniProt:
M4CR91
LinkDB
All DBs
Position
A03:4973752..4975885
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AA seq
196 aa
AA seq
DB search
MNVASETEVRGERKKKRPEMFFHIVLERNMQLHPRFFGQNLRENLVSKLIKDVEGTISGR
HGFVLAVTGIESIGKGLIRDGTPFVTFPVKYRCVVFRPFEGEVLEAVVTRVVQHGFFAEA
GPLKIFVSNHCIPDDMEYQAGDMPTYTKSDGSVRIQEDCEVRLKVFGFSIDATEISCVGS
IKERFLGLITDPGAVA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagcttcagagacagaagtgagaggagagcgaaaaaaaaagcgaccagagatg
ttcttccacatagttttggagcgcaacatgcaattacatccacgattctttggtcaaaac
cttcgtgaaaacctcgtctctaagctcataaaagatgtcgagggcactatcagtggccga
catgggtttgtattagcggtaactggaatagaaagcataggaaaaggattgatccgagac
gggactcctttcgtcaccttccctgttaagtaccgatgcgttgttttcagacctttcgaa
ggcgaggttctggaagctgttgtcacacgggtcgttcagcacggattcttcgctgaagct
ggccctcttaagatttttgtgtccaatcattgcataccagatgatatggagtatcaggct
ggtgacatgcctacttacacaaaatcagatggatcagttaggatccaggaagactgtgaa
gtgagactaaaggtctttggctttagtatcgatgccacagagatctcctgtgtgggtagc
atcaaagaaagatttttggggctcataaccgatcctggagccgttgcataa
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