Brassica rapa (field mustard): 103857074
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Entry
103857074 CDS
T03449
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00270
Cysteine and methionine metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
103857074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103857074
03032 DNA replication proteins [BR:
brp03032
]
103857074
03036 Chromosome and associated proteins [BR:
brp03036
]
103857074
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
brp02048
]
103857074
Enzymes [BR:
brp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
103857074
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103857074
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
103857074
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103857074
Prokaryotic defense system [BR:
brp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
103857074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Motif
Other DBs
NCBI-GeneID:
103857074
NCBI-ProteinID:
XP_009132470
UniProt:
M4DA60
LinkDB
All DBs
Position
A01:5402072..5408167
Genome browser
AA seq
1141 aa
AA seq
DB search
MLSPAKCESEDPTAQLDLLLSSPRSEPQRLSLLLSLPNPAEAEMSTSRRSTRINCNSPKE
IGGGEGTNGKSGSSKRKISSAPVKKDSGGLSFEDIAKSLEIGVVSECRDKNDDAEGRSQV
PAKRKVDCDDMKRSSSNKRTRRSARFSKGMEDEGEENLGEEPVPSIRSPRLSGTVENGLG
LCGAKQVRGTEKLVQVSENGNSKKCEGDGFVSSKQELLGSTVNGSRVKSLGKHRSSDPNA
SGDHTSSLKISENGTSRRVVMTAALVEQESRQSRTSDCGADATVIYISDDDEEPPPAKDV
QDSVEFLYTKSSNGDVLIQGASGCTLSSGGNGRQAPLDQNSPIKSTKGKGARVTRTAVRE
KHEHGSSFFIGEPIPCEEAKERWRWRYDLKEHKSKRRGQQAEDDEDMIVANVECHYSQAK
VDNETFSLGDFACLMGNGEEPPIGKIVEFFKTTDGESYFRVQWLYRATDTVMQKQAADHE
RRRLFYSTVMNDNPIDCLISKVTVLQVSPRAGLNPNSIKSDFYFDMEYCVEFSTFQTLRT
QTSENKLECGADVTPTESIESILEDKSFSKELLVLDLYSGCGGMSTGLNLGAKISGVDVV
TKWAIDQNLAACESLKLNHPQTQVRNDSAGDFLQLLKEWGKLCKRYVRNNGHTTDTLNPE
NSTKEATESSSSTEDDSEPEEYEVEKLVDICYGDPDKTGERGLKFKVHWKGYSSNEDTWE
PAEELSNCQDAIREFVTSGFKKKILPLPGGVGVICGGPPCQGISGYNRFREVDSPLTDER
NQQIVVFMDIVEYLKPKFVLMENVVDILRLDKGSLGRYALSRLVDMRYQARLGIITAGCY
GLSQFRSRVFMWGADPNMKLPPFPLPTHDVIVRYGFPLEFERNVVAYCEGQPRDVETALV
LKDAISDLPHVSNNETRERMSYESLPETDFQRYIRSTKHDMTGSATDNCTKRTMLLYDHR
PSLLSEDDYNRVCQIPKKKGANFRDLPGLIVRNDNTVGRDPSMEPVLLPSGKRLVPEYVF
TFQQGKSKRPFARLWWDETVPTVLTVPSCSNQAFLHPEQDRILTIREAARLQGFPDYFQF
CGTVKQRYCQIGNAVAVSVSRALGYSLGMAFRGLAGDENMIKLPQKFSHSSYLQLQESIP
H
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgttatctccggcgaaatgtgagtcagaagaccccacagctcagctggatctcctcctc
tcttctcctagatccgaaccccaacgcctctctctcctcctctctcttcccaatcccgcc
gaagcagagatgagcacgagcaggagatccacgaggatcaattgtaattcgcctaaagag
attggcggaggagaaggtaccaacggaaagtctggatcgagtaagagaaagattagtagc
gctccggttaagaaagattctggcggattgtcattcgaagacatagccaagagcttggag
attggagtcgtttccgagtgccgagataagaacgatgatgctgaaggtagatcgcaagtt
ccggctaagaggaaagttgactgtgatgacatgaagcgttctagcagtaataaacggacg
aggagatctgcgagattcagtaaagggatggaggatgagggagaagaaaatctaggcgag
gagcctgttccatccattagatctccaaggctatctggaactgttgaaaatggtttggga
ttatgtggtgcaaaacaggtgagaggaactgagaagctggtgcaagttagtgagaatggt
aactcgaagaaatgtgagggtgatggctttgtttcatctaagcaagagctattagggtca
actgtaaatggtagtagggtcaagtcgttaggaaaacacagatcttctgacccaaatgcg
agtggtgatcacactagctctttgaaaattagtgaaaatggtacgagtcgccgagtggtg
atgacagctgcgttagtggaacaagagtcacgtcagagtagaactagtgactgcggtgct
gatgctactgtgatctatatctctgacgacgatgaagagccgccgccagccaaggacgta
caagattcggttgaatttttgtatacgaaaagctctaatggagatgttttgatacaaggt
gcaagtggatgtaccctctcctcggggggaaatgggagacaagcaccactggatcaaaat
agtccaattaaatcaaccaagggaaagggtgcgcgagtgacccgtactgctgtccgtgaa
aagcatgaacatggttcctcctttttcattggagagccaattccttgcgaggaggctaaa
gaaagatggcgctggagatatgacctcaaggagcacaaatctaagaggagaggccaacag
gcagaagatgacgaagacatgattgttgcaaatgtggaatgccactattcacaggcaaaa
gtcgacaatgaaacgttcagcctcggagactttgcctgcctaatgggtaatggagaagag
ccacctatcggcaagatagtagagttttttaagacaacagatggagaaagctacttccga
gttcagtggttgtacagagcaacggatacagtaatgcagaagcaggctgctgatcatgag
agaaggcgtctcttctactctactgtaatgaatgataatccaatagattgtcttatttct
aaagttactgttttacaagtatcacctagggcaggattaaatcccaattctataaaatct
gacttttattttgatatggagtactgcgtggagttttcgacatttcaaaccttgagaact
caaacttccgaaaacaagcttgagtgtggtgccgatgtgacacctacagaatccattgaa
tctattttggaagataaaagttttagcaaagagcttctggtgcttgatctttacagtggt
tgtggtggaatgtccactgggttaaatcttggagccaagatttctggagttgatgtcgtg
acgaaatgggctattgaccagaacttggctgcctgtgagagcttgaaactgaaccatcca
cagacgcaggttaggaatgactctgctggagatttcctccaacttttgaaggagtggggt
aaattatgcaagcgctatgtgcgtaacaatggtcatacaactgatacattaaaccccgaa
aattcaacaaaagaagccactgaaagtagctcttctactgaagatgattcagaacctgag
gagtacgaagttgaaaagctggttgatatatgctatggtgatcctgacaagacaggagaa
cgtggcctgaagtttaaggtgcactggaaaggatatagcagcaacgaagatacttgggag
ccagcagaggaattgagcaattgtcaagatgccatccgggagtttgtaacaagtggattc
aagaagaagatcttgccacttcctggcggtgttggcgtgatatgtggtggacctccatgt
caaggaattagtggctataaccgcttcagggaagttgattctccgttgactgatgaaagg
aatcagcaaattgtagttttcatggacatagttgagtatctgaaacccaaattcgtgttg
atggaaaacgttgttgatattctgcgtttggacaaaggttctcttgggaggtacgctttg
agccgtcttgtggacatgagataccaagcgaggctaggtatcataacagctggttgctat
ggtctttcccaatttcgttcccgagttttcatgtggggagctgatccaaacatgaaactg
cctccgtttccgcttccaacccatgatgttattgtcagatatgggtttcctcttgagttc
gagcggaatgtagttgcttactgtgaaggccagcccagagatgttgaaacagctcttgtt
ctaaaagatgcgatatcagatcttcctcatgtgtcaaacaacgaaacccgggaaagaatg
tcctatgaaagtctcccagagacagatttccagagatacattagatcaaccaaacacgat
atgactggctctgcgactgataactgtacaaaaaggacgatgctactgtatgatcacagg
ccgtcccttttgtctgaagatgattataaccgagtctgtcaaatcccaaagaagaaggga
gctaatttcagggatcttccagggttaatcgtcagaaacgacaatacagtcggccgtgat
ccatcaatggaacctgtccttctgccatcaggaaagcgtttggtaccagaatatgtcttt
acttttcagcaagggaaatctaaaagaccgtttgcgcgtctttggtgggacgaaacagtt
ccaaccgttctgacagtccccagctgcagcaatcaggcgtttttgcatccagagcaagat
cgaatactaaccataagagaagccgcacggcttcaaggtttccctgattacttccagttc
tgtggaaccgttaaacaaaggtactgtcagattggaaatgcagtggcagtctcggtttct
cgtgctttgggctattctcttggtatggctttccgtggtctagccggtgacgagaatatg
ataaaacttccccagaagttttctcattcaagttaccttcagcttcaagaatccattcct
cactaa
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