Brassica rapa (field mustard): 103860196
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Entry
103860196 CDS
T03449
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1
Organism
brp
Brassica rapa (field mustard)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
103860196
NCBI-ProteinID:
XP_033142287
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All DBs
Position
A03:complement(19135799..19139382)
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AA seq
1026 aa
AA seq
DB search
MNRRTMEKLYGCFLLLFFFIIFTIIHSTTALTDEEASFLTKRQLLTLPENDNLLDDIEYE
VDADLKFANNRLKRAYIALQAWKKAIYSDPFNTSSNWVGTNVCSYKGVFCAPALDDPNMM
VVAGIDMNHADIAGYLPHELGLLTDVALFHINSNRFCGIIPKSLSKLTLMYEFDVSNNRF
VGPFPIVALSWPSLKFLDVRYNDFEGKLPPEIFDKDLDAIFLNNNRFESIIPETIGKSTA
SVVTFAHNKFSGCIPKTIGKMKNLNEIMFIGNNLSGCFPNEIGSLNNVTVFDASKNGFVG
SLPSSLSLLDNVEQMDFSYNKLTGFVTDNICKLPKLSNFTFSYNFFNGEAQSCVPGTSQD
KQFDDTSNCLQNRPQQKSAKECLPVVSRPVDCSKDKCAGGGGGSNPTPNPPKTPEHKPNT
PKLEEPSKPNPKESPKPQQPSPEPETEPSKPKEPKPETPKHDSPKPEQPKPKHESPKQES
PKKQPPKQEESPEPDMTKPEEPPKHEQSPKTETPKIRSPPMEPPVTDDPYDASPIKKRRP
QPPSTEETPQSSPVHSPPPPLVFSPPPPVHSPPPPPVHSPPPPVFSPPPPPVYPPPPPVY
SPPPPPPVLSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPPVF
SPPPPAPIYSPPPPPPVHSPPPPPVHSPPPPMYSPPPPVHSPPPPVYIPPPSSPINSPPP
AFSPPPEPATPLPPATSPMINSPTPSSEVKEESSPVQAPTPDSETVEAPSESDHSPVFKS
SPAPAPSSEIEEESSPVQAPTPYSKTIEAPSESDHSPVFKSSPAPAPSLKIEEESSPVQA
PTPDSETVEAPSESDHSPVFKSSPAPTPSSEIEEHSSPVQAPTPDSETVEAPSESDHSPV
FKSSPAPTPSTEIEEDSSPVQAPTPNSKTVEAPSEYDQSPVLNSAPAPTPISQPNHTPTP
LSQPDISPVPSEEQIEAPSPSTQEVKPPVTTSTPPKNNDAGDDDFILPPNIGFQYASPPP
PMFPGY
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaagaacaatggagaagctttatggctgcttccttctcctattcttttttatc
attttcactatcatacattctacaaccgctctcaccgatgaagaagcttcatttctcaca
aaacgtcaacttttaactttaccggagaatgacaatcttctcgatgatatagaatatgaa
gtcgatgcagacctcaaatttgctaacaaccgactcaagagggcttacattgcccttcaa
gcttggaaaaaggcaatatactctgatcccttcaacacatcatctaactgggttggtaca
aacgtgtgttcttataaaggtgtgttctgcgcgccagcacttgatgatccaaacatgatg
gttgtggcgggcattgatatgaaccatgcagatatagctggatatttgcctcatgaacta
ggtctgttgaccgatgtcgccttgtttcatattaattccaacagattctgcggtattatc
ccaaaaagcttgtcaaaactgacattaatgtatgaattcgatgtgagcaacaatcgtttt
gttggtccgtttccgatagttgcactctcttggccatctttgaagttccttgacgtgaga
tacaacgattttgaagggaaacttcctccagagatctttgataaggatctcgatgctatt
ttcttgaacaacaatagattcgagtcaatcatccctgagacaatcggtaaatcgactgct
tccgtcgtgacctttgcgcataataaattcagcggttgcatcccaaaaaccattggtaag
atgaagaatctcaacgagattatgtttatagggaataacttgagcggttgtttccctaac
gagattggatcgttgaacaatgtgactgtgtttgatgcgagcaagaatgggtttgttgga
agtttaccgtcaagcttgtcactcttagataatgtggaacaaatggatttctcatacaat
aagctcactggatttgttacagacaatatttgcaagctgccaaagttgtcaaattttaca
ttttcttataacttcttcaatggagaagcgcaaagttgtgttcctgggacaagtcaagat
aaacaatttgatgatacaagcaattgcttacaaaacagaccacaacaaaagtcggctaaa
gaatgtttaccagtggttagtcgtcctgtggattgcagcaaggacaagtgtgccggtggt
ggcggaggctcaaatccaacacctaatccaccaaaaacaccagagcataaaccgaataca
ccaaaattagaagaaccatctaaaccaaatccaaaagaatctcccaaaccacaacaacct
agtccagaacctgagacagaaccttctaaaccaaaagaacctaaaccagaaacaccaaaa
cacgattcaccgaaaccagaacagccaaagcctaagcatgagtcaccaaaacaagagtca
cctaagaaacaaccaccaaaacaagaagaatctcctgaaccagatatgacaaaacctgaa
gagccacctaagcatgaacaatcaccaaaaacagaaacaccaaaaattaggtcgccgcca
atggaaccacctgtcacagacgatccttatgatgcatctccgataaaaaaacgtcgtcct
caaccaccgtcaacagaagaaacgccacaatcatcaccagtacactccccaccaccacct
cttgtattttcccctcctcctccagtccattctcctccaccaccaccagttcattcccca
ccgcctcctgtattttcacctcctccaccaccagtttatcccccaccacctccggtatac
tctcctcctccaccaccaccagttctctctcctcccccaccagttcattctcctccccca
ccagtccactctcctcccccaccagtccattcaccaccaccaccagttcactctccacca
ccaccagtccattctcctcccccaccggtccattcaccaccaccacccccaccagttttc
tctccaccaccacctgcacctatctactctcctccacctcctccaccagtccactctccg
ccaccaccaccagttcactctccaccacctccgatgtattctccaccacctccagttcat
tctccgcctcctccagtctacattccaccaccttcatcaccgataaattctcctcctcca
gctttttcaccgccaccagaaccagcaacgcctttaccaccggcaacatctccaatgata
aattctccaacaccttcatcagaagtgaaagaagagtcatcgccagttcaagctccaact
ccagactctgaaactgttgaagcaccatcagaatcagatcattcaccagtgttcaaatcg
tcacccgctccagcaccttcatcagaaatagaagaagaatcatcgccggttcaagctcca
actccatactctaaaaccatcgaagcaccatcagaatcagatcattcaccagtgttcaaa
tcgtcacccgctccagcaccttcattaaaaatagaagaagaatcatcgccagttcaagct
ccaactccagactctgagaccgtcgaagcaccatcagaatcagatcattcaccagtgttc
aaatcatcaccagctccaacaccttcatcagaaatagaagaacattcatcaccagttcaa
gctcccactccggactctgagaccgttgaagcaccatcagaatcagatcattcaccagtg
ttcaaatcgtcacccgctccaacaccttcaacagaaattgaagaagattcatcaccggtt
caagctccaactccaaactctaagaccgtagaagcaccatcagaatatgatcaatcacca
gtgctcaattcagctcctgctccgacaccaatctcccagccgaatcatactccaactcca
ctttcccaaccagatatatctccagttccttcagaagaacaaatcgaagcaccatcacca
tcaacacaagaagtaaaaccaccagttacaacatcaacaccaccaaaaaataatgatgct
ggtgatgatgatttcatccttccaccaaatataggattccaatacgcatcgccaccacca
ccaatgtttcctggttactaa
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