Brassica rapa (field mustard): 103864218 Help Entry 103864218         CDS       T03449                                  Name (RefSeq) protein CLP1 homolog 5-like   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism brp  Brassica rapa (field mustard) Pathway brp03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:brp00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     103864218  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:brp03019]     103864218 Enzymes [BR:brp01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      103864218 Messenger RNA biogenesis [BR:brp03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      103864218 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P CLP1_N Clp1 nSTAND3 rve AAA_22 AAA_29 AAA_24 FtsK_SpoIIIE ABC_tran MMR_HSR1 GTP_EFTU ATP-synt_ab DUF1611 AAA_7 Roc Motif Other DBs NCBI-GeneID:  103864218 NCBI-ProteinID:  XP_009140224 UniProt:  M4ENH8 LinkDB All DBs Position A04:complement(11610242..11612769) Genome browser AA seq 441 aa AA seqDB search MTPLEIDMSYCGLSMNSDAATGATEFNPQVRRVTLEKQSEIRIQVPQISPLKLRVLHGKV EIFGSELPRNVWLTFPPLQQFAVFTWYGATLEIDGVTETDNTSVETPMVSYLSIHNSLQV QRHRVTSSTRDYVSSQGPRVIIVGDTDSGKSTLAKMLLSWAANDGCKPTFVDLNIGQSSI TIPGTIAATSVETPMDPVEGLPLHKALVHYFGHNTPTNNLRLYKYLVEELARELEEEFAI NAESRRSGMVIDTMGWTSGLGYQLLLHAIRTFNASLVIVLGQETELVYDLNKAFKFKKNV QILNLDRSSGVFSRYSDFRKMLRNNSIQRYFSGATNNLTAYTKTAKFTDMQVYRIGALIE KSRSTEPLRITPVLIDKDLLNTVLAISYAKQPHHIISSIVAGFVYITDVDLGEERITYLS PSAAELPSKIFIMGTLTWHKT NT seq 1326 nt NT seq  +upstreamnt  +downstreamnt atgacacctttagagatagacatgtcttactgtggtctgtcgatgaacagtgatgcggct acgggtgctactgagtttaatcctcaagtaagaagagtaacgttagagaaacaaagcgaa ataaggatccaagtcccccagatttcgcctctcaaactccgagtgctccatggcaaagtt gagatttttggttccgagcttccacgaaacgtctggctcacgtttcctcctctccagcaa ttcgccgtctttacgtggtatggtgcaacactcgaaatagatggcgtcacagagactgac aatacatctgttgagacacctatggtaagctatcttagtatacacaactctctacaagta caaagacatcgggttacgtcctcaacaagagattatgtttcttcacagggaccaagggtt atcattgtcggagatactgactctggaaagagcacattagccaaaatgcttcttagttgg gcagcaaatgatggttgcaaaccgacctttgttgaccttaatatcggacaaagctcgata accataccaggaactattgctgctacatctgttgaaacgccaatggatcctgttgaagga ttacctcttcataaggcccttgtgcactattttggtcacaacacaccgacaaacaacctt aggctgtacaaataccttgttgaagagcttgctcgagaattagaagaagagtttgctatt aacgctgaatctcgacgttctggtatggtgattgacacaatgggatggactagtggtctt ggttatcagcttcttctccatgcaataaggacttttaatgcatctttggtcatcgtcctt ggtcaagaaacagaacttgtctatgatctgaacaaagctttcaaattcaagaaaaacgta caaatcttgaatcttgacaggtcatctggagttttctccaggtattctgattttcgcaaa atgttgaggaacaatagcattcagagatatttcagtggagccacaaacaatctcacggcc tacaccaaaaccgccaagttcactgatatgcaagtttatcgaatcggtgccttgatagag aagtcaaggtctactgaacctttgaggatcacacctgtgttgattgacaaagatcttctg aatacagttctggctatctcatacgctaaacagcctcatcacattatctcaagcattgtt gctggatttgtgtatattacggatgttgatcttggtgaagaaagaattacgtatctctct ccatccgctgctgaactgcctagcaagatattcatcatggggactttgacatggcacaaa acttga

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