Brassica rapa (field mustard): 103871791
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Entry
103871791 CDS
T03449
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1 isoform X2
KO
K12236
transcriptional repressor NF-X1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103871791
04121 Ubiquitin system [BR:
brp04121
]
103871791
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
103871791
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
103871791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
103871791
NCBI-ProteinID:
XP_009148338
LinkDB
All DBs
Position
A06:complement(3928515..3935338)
Genome browser
AA seq
1117 aa
AA seq
DB search
MSSQVRRDRRHQSSQQTWVPRGASTSVAVVNEPSHPPANNTAGVSESLVAGAASRPVYPQ
RQHNGSVRPPYNQHQRNNNVAAPPPHNRQRRNNNAPGATLPDDNRQRVGSRTRPVYQGKR
VAKEDNIALTNPNLPQLVQEIQEKLVKSSIECMICYDKVGRAANIWSCSSCYSIFHMHCI
KKWARAPTSIDLLAEKNQGDNWRCPGCQSVQLTSSREICYRCFCGKRKDPPADPYLTPHS
CGEPCGKPLEKELFAGAETTSEDLCPHICVLQCHPGPCPPCKAFAPPRSCPCGKKTIHTR
CSERRSLLVCGQRCEKLLNCGRHQCEKTCHVGPCDPCQVLVNATCFCKKKVETVICGDMN
VKGELKAESGVYSCNLNCGKPLGCGNHFCSEVCHPGPCGDCDLLPGRVKTCYCGKTRLEE
QTRQSCLDPIPFCSNICSKLLPCGLHTCNEVCHSGDCPPCLVQVNQKCRCGSTSRTVECY
ITTSSETDKFVCSKPCGRKKNCGRHRCSERCCPLLNAKKNDLSGNWDEHVCQLPCGKKLR
CGQHSCESLCHSGHCPPCLEMIFTDLTCACGNTSIPPPLPCGTPVPSCQLPCSIPQPCGH
SATHGCHFGDCPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKICGKTRRCGMHACARTC
HPEACDTYSESEAGLRVTCGQTCSAPRRDCRHTCAALCHPSQPCPDSRCEFPVTITCSCG
RITATVPCDAGGGSTSNLSVDSIYEASVLQKLPTTLQPAESSGNRIPLGQRKLSCDDECA
KQERKRVLQDAFDITPPNLDSLHFSENAAMTEIISDIYRRDPKWVLAVEERFKFLVLGKA
RGSTSALKVHVFCPMQKDKRDTVRLLAERWKLAVSNAGWEPKRFTVVHVTQKSKTPTRII
GARGGAISLGGPHPPSFDPLVDMDPRLVVSLLDLPREANISALVLRFGGECELVWLNDKN
ALAVFHDHARAATAMRRLDHGSVYHGAVVVQNGPQSPSLGGNAWGKLPSSSSWDVQKANP
WKKAVIQESDENWGADDSPIGGSSTDIQAAAWRSATSNTPVVTSVNRWSVLEPEKPNTSA
LQPLVQTEGSSSSKAAGKQPVEGSSEEVVDDWEKVCE
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaagtcaggagagataggcgtcatcagagttctcagcaaacttgggttcct
agaggtgcttctacctccgtggcggttgtaaatgagccttcacatcctcctgctaataat
acagccggagtttctgaaagtcttgtcgctggtgctgcatcacgtcctgtttatccacaa
aggcagcataacggttctgttcgtccgccttataatcagcaccaaaggaacaataatgtt
gctgctccacctccacataatcgacagagaagaaacaataatgctccgggagcaactctg
cctgatgataatcgtcaacgagttgggtctaggaccaggcctgtgtatcaggggaaaagg
gtagctaaggaggataacattgcgttgacaaacccgaacttgcctcagcttgttcaagag
atacaagagaagctggtgaagagttctattgagtgtatgatttgttacgacaaggttggg
agggctgcgaatatatggtcttgctccagctgttactccatcttccatatgcattgtatc
aagaaatgggctcgagcaccaacttctattgatttgttggctgagaaaaaccaaggtgat
aattggaggtgtcctggttgccaatctgtgcagttgacgtcgtcaagagagatatgttat
cggtgcttttgtgggaagaggaaagatccacccgctgatccatatctgactccacactca
tgcggagagccatgtgggaagccgctggagaaagagttatttgcaggagctgagacgacc
agtgaggatctttgtcctcatatctgtgtgttgcagtgtcatcctggtccttgtcctcct
tgtaaggcgtttgctccacctcgtagttgtccttgtggtaaaaagacgattcatactaga
tgctctgagcggagatctcttcttgtttgtgggcagcgttgcgagaagcttctcaactgt
gggcgtcatcagtgtgaaaagacatgtcacgttggcccttgtgatccttgtcaggtacta
gtaaatgccacatgtttctgcaagaaaaaagtggagactgttatttgcggagatatgaat
gtgaagggagaattgaaagctgaatctggtgtgtattcgtgcaatttgaactgtgggaag
ccacttggatgtggtaatcatttctgttccgaggtttgccaccctggaccttgtggcgac
tgtgacttactgcccggtagagttaagacgtgctattgtgggaaaacgcgtctagaagaa
cagaccaggcagagttgcttggacccaattcctttttgctcaaacatatgcagtaagctt
cttccttgtggattacatacttgcaacgaggtgtgccattcaggtgattgccctccttgt
ttagtgcaagtcaaccagaaatgccggtgtgggtcgacatccaggactgtggaatgctac
ataacaacttcttcagagacggataagtttgtgtgttctaaaccatgtgggcgtaagaag
aactgtgggagacatagatgtagtgagcgttgctgccctctcttgaacgcgaagaagaat
gatctatccggtaattgggacgaacacgtatgccaattaccttgtgggaagaagctaagg
tgcgggcagcattcctgtgaatctttgtgccatagtggccattgccctccttgcctcgag
atgatattcactgatctaacatgtgcgtgtggaaatacttcgattcctccaccactacca
tgcgggacgcctgttcctagctgccagcttccgtgctccattcctcagccttgtggccat
tctgctacgcatggatgccattttggagattgccctccttgttctgccccagtggaaaag
aaatgcgttggtggtcacgtggttctgagaaacataccttgtgggctgaaagacatcaga
tgtaacaagatttgtggaaagacgaggcgttgtggtatgcatgcttgtgccagaacttgt
cacccggaggcatgtgacacttacagtgaatctgaagcaggactgcgtgttacatgtgga
cagacttgtagtgctcctagaagagattgcaggcatacttgtgcagctctctgccatcct
tcgcagccttgccctgactcaagatgtgaatttccagtaacaattacatgttcgtgtggt
cgcataaccgctactgtcccttgcgatgcgggaggaggaagtaccagcaatcttagtgtt
gattctatctatgaagcctctgttttgcagaagcttccaaccacgcttcagcctgctgag
tcgagcggaaacagaatccccctcgggcagcgaaagctttcgtgtgatgatgagtgtgct
aagcaggagcgtaagcgggttcttcaagacgcgtttgatatcactcccccaaatctggac
tctttacatttcagcgagaatgctgctatgacagagattatttcggacatctacaggcgt
gatccgaagtgggtactggctgttgaagagcgcttcaagttcttggtacttgggaaagcc
agaggaagcacaagtgcccttaaggtccatgtcttctgcccaatgcaaaaggataaacga
gacacagttcgacttctagctgagagatggaaacttgcggttagcaatgcagggtgggag
ccaaaacgatttacagtggtccacgtaacacaaaagtcaaaaacgccaacacgaatcatt
ggagctaggggtggcgctatctcgctaggtgggcctcacccaccgtccttcgatccgctg
gtggatatggatccaaggcttgtggtttctttattggatctcccgagggaggcgaatatc
agcgctttagtactaagatttggaggtgaatgtgagcttgtttggctgaatgacaagaac
gctttggccgtgttccacgaccatgcccgagccgccactgccatgaggaggctggaccat
ggttctgtataccatggagcagtggtcgtccagaacggtccgcaatctccatcactcggt
ggtaatgcatggggaaaactacctagcagctcatcctgggatgtacagaaagcaaatcca
tggaagaaagcagtgattcaggagagtgatgagaactggggagctgatgattcccccatt
ggaggatcatccacagatattcaagccgctgcgtggagatcagcaacgagcaacactcca
gtggttacttcggttaaccgttggagtgtactggagccagagaagcccaacacgtccgct
ttgcagccattggttcagacagaagggagcagcagttcaaaagctgcaggtaaacaaccg
gtggaaggctcaagcgaagaagtggtggatgattgggagaaggtatgcgagtga
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