Brachybacterium avium: CFK39_12540
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Entry
CFK39_12540 CDS
T04950
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brv
Brachybacterium avium
Pathway
brv03420
Nucleotide excision repair
brv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFK39_12540
03430 Mismatch repair
CFK39_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_12540
Enzymes [BR:
brv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK39_12540
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFK39_12540
MMR (mismatch excision repair)
Other MMR factors
CFK39_12540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ASK66502
UniProt:
A0A220UF30
LinkDB
All DBs
Position
2798462..2801320
Genome browser
AA seq
952 aa
AA seq
DB search
MSSLFDDLSLPDAFRRLDGVSVTPGTRDRGRAEDSAAPAGDQDRLGGRRPNTGPSIGEEP
PYADAPPVEDEPPFEDEPPFDDAPPPEDEDLPLPPPELAQAPHPADRPAPSAPGPGAGAG
APGLTVLTDGLNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLRSGEALPGEILA
ITFTNKAAAEMRERVGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADS
LRLITTIAKDLELDTKKHAPRALASRISTLKNDLVDPIDFADQAESAKNPFERTLARIFT
NYTARLRQANAVDFDDLIGLTVTLLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRE
LVGEDPRADLTVVGDSDQSIYAFRGATIRNIVEFEQDFPTARTIVLEQNYRSTQHILSAA
NSVIEENAGRRKKNLWTDQGEGEQITLYVADDEREEARYIGRQIDALVDDGRRAGDIAIF
YRANAQSRALEDQLIRVGLPYKVIGGTRFYERREIKDAIAYLRVLTNPADEINLRRILNV
PKRGIGDRAEAAVAMLAERERIGFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQAMAA
DGAGPADLLEAILQRSGYYAELQGSEDPQDESRLENLAELVSVAAEFEAQMEEADAVASE
YEDADEAGGSDATGAVADAAADGSANPLTDAATPGTDLAPGADVAPDAALTAPDDPEASL
VDRFLEKVSLVADADQIPGEEDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDP
EELQEERRLAYVGITRAREKLFLTRAQMRSMWGQTQFMPASRFLDEVPEEVLDVARAGST
LSGAGFGGGYSGSGSYGGGSSSSSRRGPSFSGGIGGGRSDIKRPSLGSGRRATPADKLPQ
LAVGDRITHDSFGMGTVTEVAGQGEKTQVEVQFKAPHGTKRLVLRYAAITKL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctcttcgatgatctgtcgctgcccgacgccttccgccgcctcgacggagtc
tcggtgaccccgggaacccgcgaccgggggcgcgcggaggactccgcggcgcccgccggt
gaccaggaccggctcggtgggcggcggccgaacaccgggccgtcgatcggggaggagccg
ccgtacgcggacgccccgccggtcgaggacgagccgccgttcgaggacgagccgccgttc
gacgatgccccgccgccggaggacgaggatctgccgctgcccccgccggagctcgcgcag
gccccgcatccggccgatcgacccgcgccctccgccccgggaccgggagcaggggccggt
gcccccggcctcaccgtgctgaccgatggcctgaacccggcgcagcgcgaagcggtcgag
catcggggctcgccgctgctgatcgtcgccggcgccggctccggcaagacccgagtgctc
acccggcgcatcgcccacctgctgcgctccggggaagcgctgccgggggagatcctcgcg
atcaccttcaccaacaaggccgccgccgagatgcgcgagcgcgtgggcgagctggtgggc
ccggtcgcccgcagcatgtgggtctccaccttccacagcgcctgcgtgcggatcctgcgc
cgcgacgccgccgcggccgggctgaagagctccttcacgatctatgacagcgccgactcg
ctgcgcctgatcaccacgatcgccaaggacctcgaactggacacgaagaagcacgccccg
cgtgcgctcgcctcgaggatctccacgctgaagaacgacctcgtggacccgatcgacttc
gctgatcaggccgagagcgcgaagaatcccttcgagcggaccctcgcacggatcttcacg
aactacaccgcacggctgcgccaggccaacgcggtggacttcgacgacctgatcggtctg
accgtcacgctgctgcgggagaacccggcgatccgcgagggctaccgccgccgcttccgg
cacctgctggtggacgagtaccaggacaccaacaccgcccagtaccagctggtgcgggag
ctggtgggggaggacccccgcgccgacctcaccgtggtgggcgactcggaccagtcgatc
tacgccttccgcggcgccacgatccgcaacatcgtcgagttcgaacaggacttccccacc
gcgcgcaccatcgtgctcgagcagaactaccgctccacccagcacatcctgtccgccgcg
aactctgtgatcgaggagaacgccgggcggcgcaagaagaacctgtggaccgatcagggc
gagggcgagcagatcaccctctacgtcgccgacgacgagcgcgaggaggcgcgatacatc
ggccgccagatcgacgcgctggtcgacgacggccgccgggcgggggacatcgcgatcttc
taccgcgccaacgcccagtcccgcgcgctcgaggaccagctgatccgcgtgggcctgccg
tacaaggtgatcggcggcacccgcttctacgagcgccgcgagatcaaggatgcgatcgcc
tatctccgagtgctcaccaacccggccgatgagatcaacctgcgccgcatcctcaacgtc
cccaagcgcggcatcggcgaccgggccgaggcggcggtcgcgatgctcgccgagcgggag
cggatcggtttcggcgaggcgctgcgccgcgcggaggaggcccccggcatcgccacccgt
tcactgaacgccgtgcggaccttcgtggcgatgctcgaggacctccaggcgatggccgcc
gacggggccgggcccgccgatctgctcgaggcgatcctgcagcggtcgggctactacgcc
gagctgcagggcagcgaggacccgcaggacgagtcccggttggagaacctcgccgagctg
gtcagcgtcgctgccgagttcgaggcgcagatggaggaggccgacgccgtcgccagcgag
tacgaggacgcggacgaggcagggggatccgacgcgacaggtgctgtggcggatgctgcg
gcggatggctcggcgaacccgttgacggacgccgcgacgccggggacggacctcgcccct
ggggccgacgtcgcccccgacgccgcgctgaccgcgccggatgaccccgaggcgagcctc
gtggaccgcttcctggagaaggtctcactggtcgccgatgcggatcagatcccgggcgag
gaggatcagttcgtcaccctgatgaccctgcacaccgccaagggcctcgagttcccggtc
gtgttcctcaccgggatggaggacggcaccttcccccacaaccgcaccctgagcgatccc
gaggagctccaggaggagcggcgcctggcctacgtaggcatcacccgcgcccgcgagaag
ctctttctgacccgggcccagatgcgatcgatgtggggacagacccagttcatgcccgcc
agccgcttcctcgacgaggtgcccgaggaggtgctggatgtggcgcgcgccggctccacg
ctcagcggcgccggattcggcggcggctacagcggctccggcagctacgggggcggctcc
agctcgagcagccgccgcggcccctccttcagcggcggaatcggcggtgggcgcagcgac
atcaaacgccccagcctcggctccggccgcagagcgaccccggccgacaagctgcctcag
ctcgcggtgggcgaccggatcacccacgactccttcgggatggggacggtcaccgaggtc
gcgggtcagggggagaagacccaggtggaggtgcagttcaaggccccgcatggcacgaag
cgcctggtgctgcgctatgcggcgatcaccaagctctga
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