Brevibacillus sp. 7WMA2: GOP56_11560
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Entry
GOP56_11560 CDS
T06452
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
brw
Brevibacillus sp. 7WMA2
Pathway
brw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GOP56_11560
09124 Replication and repair
03420 Nucleotide excision repair
GOP56_11560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brw03021
]
GOP56_11560
03400 DNA repair and recombination proteins [BR:
brw03400
]
GOP56_11560
Enzymes [BR:
brw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GOP56_11560
Transcription machinery [BR:
brw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GOP56_11560
DNA repair and recombination proteins [BR:
brw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GOP56_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DYN1_lid
FliS_cochap
Motif
Other DBs
NCBI-ProteinID:
QIC06187
LinkDB
All DBs
Position
2835205..2836896
Genome browser
AA seq
563 aa
AA seq
DB search
MSFQPHLPLIVQSDRSILVEVENPLFDEARQAISGFAELIKSPEYIHTYRLTPLSLWNAA
ASQLQAEQILETLSRYSKYGLPPSVADEVKRAFSRYGLIQMHTYEDQIGLTSVDPLILAE
VMGYQSMQPYIEEKRSESLYILKPYSRGLVKQALIKLGYPVQDLAGYQEGEPCPMELVPC
DNTGTPFSLRDYQLAAVDAFYANGTAYGGSGVLCLPCGAGKTIIGIGTMSRFETATLILT
TSTTSVRQWINEIITKTTLTADMVGEYTGEQKEVRPVTVTTYQMVTSRQRGSEEFPHMNL
FTDYNWGLIIYDEVHMLPAPIFKMTSSIQAKRRLGLTATLVREDGKEDEVFSLIGPKKYE
MPWKALEAQGWIATAFCKEVRLPLPSIYREAYAFSGTREKYRLAAENPIKVNWVQKLLRQ
HKDDHILIIGQYIKQLELVANTLGLPLITGKTPEEDRGRYYEMFKRGEIKQLVISKVANF
AVDLPDANVAIQISGTFGSRQEEAQRLGRILRPKATNQAYFYTLVSRDTREQEFASKRQM
FLLEQGYHYQIIEPDEEPENLGG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttcaaccccatttaccactaattgtacaaagtgatcggagcattttagtagaa
gtggagaatcccttatttgatgaagcaagacaagcgattagtggctttgctgagcttatt
aaaagcccagaatatatacatacttaccgtctaactccactttctttgtggaatgcagcg
gcaagtcagctacaagcagagcaaatccttgaaacactcagccgctacagtaaatatgga
ctgcccccttctgttgcagatgaggttaaaagagccttttcgagatacggattgatccag
atgcatacctacgaggatcaaatcggactgacaagtgtagaccctcttattctggcagaa
gttatgggctatcaatctatgcagccttatatagaagaaaaacgttcggagagtctgtat
atactgaagccgtactcacgtggactagtaaaacaggctcttattaagcttggctatccc
gtgcaggatttagccggctatcaggagggcgaaccgtgcccgatggagcttgtcccctgc
gataatacaggaactcctttttccctgcgagactatcagctagctgccgtggatgccttt
tatgccaatggtactgcttacggtggcagtggtgttttgtgcttgccctgtggagccggg
aaaaccattattggaattggtaccatgtcacgctttgagacggcgactctcatcttaaca
acaagtacaacatctgtccgacaatggatcaacgaaatcataacgaaaaccactctaacc
gccgacatggtaggcgaatatactggtgaacaaaaagaggtgcgacctgttaccgttacc
acctatcaaatggtgacttcaagacagcgtggctcagaagagtttccccatatgaattta
tttacggattataactggggactaatcatttacgacgaggttcacatgctccctgctcct
attttcaagatgacctcaagcattcaggccaaacggaggttaggattaaccgctactcta
gtacgtgaggatggaaaagaagatgaagtcttttccctaatcggccccaaaaaatacgaa
atgccatggaaagcgttagaagctcagggctggatcgcaacggccttctgtaaggaagtc
agactaccacttccttctatttatcgcgaggcctacgccttttccggcacacgtgagaaa
tatcgactagcagcagagaatccgattaaggtgaactgggtgcaaaaattgctgaggcag
cataaagacgatcatatcctcattattggtcagtacatcaaacaattagaattggtggcc
aacacgctaggcttaccgctcattacaggtaaaacacctgaggaagaccggggtcgctat
tatgagatgtttaagcgtggagaaatcaaacagctagtaatatctaaagtcgccaacttt
gctgtagacttacctgatgctaatgttgcgattcaaatctcaggtacatttggttctaga
caggaggaagctcagcgattgggtcgtatcttgcgtcctaaggcaaccaaccaagcctat
ttttatacactggtgtcacgagatacccgtgaacaggaatttgcgagcaaacgccaaatg
tttctattagaacaaggttatcactatcaaatcatagaacctgatgaagagcctgaaaat
cttggagggtaa
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