Brachybacterium sp. P6-10-X1: BH708_02070
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Entry
BH708_02070 CDS
T04713
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
brx
Brachybacterium sp. P6-10-X1
Pathway
brx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BH708_02070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brx03400
]
BH708_02070
DNA repair and recombination proteins [BR:
brx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BH708_02070
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BH708_02070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_16
AAA_22
AAA_5
UB2H
DUF87
AAA_7
Helicase_RecD
nSTAND3
AIG1
LUC7
Motif
Other DBs
NCBI-ProteinID:
APX31705
UniProt:
A0A1P8NBL1
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All DBs
Position
470136..472238
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AA seq
700 aa
AA seq
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MRPVTDLVRAEHPFEVVSEYNPSGDQPTAIADLTRRINDGEQDVVLLGATGTGKSATTAW
LIEQVQRPTLVMAHNKTLAAQLASEFRELLPHNAVEYFVSYYDYYQPEAYVPQSDTYIEK
DSSVNAEVERLRHSATNSLLTRRDVVVVSSVSCIYGLGTPQEYVDRMVQLARGQQLDRDE
LLTRFVDMQYDRNDVAFERGTFRVRGDTVEIIPMYEELAIRVEFFGDEIDALYTLHPMTG
EVIREEDHIHIFPASHYVAGPERLTRAIGTIEVELGERLEELESQNKLLEAQRLRMRTTH
DLEMLRQMGSTNGVENYSRHLDGRDPGTAPNTLMDYFPEDFLLVIDESHVTVPQIGAMFE
GDRSRKRTLVDFGFRLPSALDNRPLTFGEFTERTGQTVYLSATPADYELGRADGYVEQII
RPTGLVDPEVIVKPVKGQIDDLREEIDKRVQREERVLVTTLTKRMAEDLTDFLLENGVRV
QYLHSDVDTLRRIELLRSLRQGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSRT
SLIQTIGRAARNVSGQVHMYADTVTDSMQSAIDETNRRREKQIAFNTENSIDPTPLRKRI
ADVTDMLAREDIDTDTLMATDYRSGKERVSRDRARANAVDAVSGRTVDLGDDPVGSLTGM
IDEMTGQMHQAAETLQFEQAARLRDEVQELKKELRAIQRS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccgtcaccgatctggtccgcgccgagcatcccttcgaagtcgtctccgagtac
aatccctcgggcgaccagccgaccgccatcgccgatctcacccgccgcatcaacgacggg
gagcaggacgtcgtgctgctgggggccaccggcaccggcaagtccgccaccacggcgtgg
ctgatcgagcaggtccagcgccccactctggtgatggcccacaacaagaccctcgccgcg
cagctggccagcgagttccgggagctgctgccgcacaacgcggtggagtacttcgtctcc
tactacgactactaccagccggaggcgtacgtcccgcagtcggacacgtacatcgagaag
gactcctcggtcaacgccgaggtggagcgactgcggcacagcgcgaccaactccctgctg
acccgtcgtgacgtggtggtggtctcctcggtctcgtgcatctacggcctgggcaccccg
caggagtacgtcgaccggatggtgcagctggcccggggacagcagctggatcgcgacgag
ctgctgacccgcttcgtggacatgcagtacgaccgaaacgacgtcgccttcgagcgcggc
accttccgagtgcgcggcgacaccgtcgagatcatcccgatgtacgaggagctcgccatc
cgtgtcgaattcttcggcgacgagatcgatgcgctgtacacgctgcacccgatgacgggg
gaggtgatccgcgaggaggaccacatccacatcttccccgcctcccactacgtcgccggc
cccgagcggctgacccgcgcgatcggcactatcgaggtcgagctcggcgagcggttggag
gagctcgagagccagaacaagctgctggaggcgcagcggctgcgcatgcgcaccacccat
gatctggagatgctgcggcagatgggctcgaccaacggcgtcgagaactactcccgccac
ctcgacgggcgcgatcccggcaccgccccgaacaccctcatggactacttccccgaggat
ttcctgctggtcatcgacgaatcccatgtgacggtcccgcagatcggtgccatgttcgag
ggagaccgctcccgcaagcgcaccctggtcgacttcggcttccgcctgcccagcgcgctg
gacaaccgcccgctgaccttcggcgagttcaccgagcgcacggggcagaccgtctacctc
tccgccaccccggccgactacgagctgggcagggccgacgggtacgtcgagcagatcatc
cgccccacggggctcgtggatcccgaagtgatcgtcaagcccgtcaagggccagatcgac
gatctgcgcgaggagatcgacaagcgggtccagcgcgaggagcgcgtgctggtgaccacg
ctgaccaagcggatggcggaggatctgacggacttccttctggagaacggggtgcgcgtg
cagtacctgcactccgacgtcgacaccctgcgccgcatcgagctgctgcgttcgctgcgc
cagggcgagttcgacgtgctggtcggcatcaacctgctgcgcgagggcctggacctgccc
gaggtctcgctggtggcgatcctcgatgccgacaaggaggggttcctgcgctcgcgcacc
tcgctgatccagaccatcggccgtgcggcccgcaacgtctccgggcaggtccacatgtac
gcggacaccgtcaccgactcgatgcagtccgcgatcgacgagaccaaccggcgccgcgag
aagcagatcgcgttcaacaccgagaacagcatcgaccccactccgctgcgcaagcggatc
gccgacgtcaccgacatgctcgcccgcgaggacatcgacaccgacacgctgatggcgacc
gactaccgctccggcaaggaacgggtctcccgggatcgagcacgcgccaacgccgtggac
gcggtcagcggccgcacggtcgacctcggcgacgatccggtcggttccctgaccggcatg
atcgacgagatgaccggtcagatgcaccaggccgccgagaccctccagttcgagcaggcg
gcccggctgcgcgacgaggtccaggagctgaagaaggagctgcgcgcgatccagcggtcc
tga
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