KEGG   Bacterioplanes sanyensis: CHH28_17285Help
Entry
CHH28_17285       CDS       T04982                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bsan  Bacterioplanes sanyensis
Pathway
bsan03030  DNA replication
bsan03410  Base excision repair
bsan03420  Nucleotide excision repair
bsan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bsan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHH28_17285
   03410 Base excision repair
    CHH28_17285
   03420 Nucleotide excision repair
    CHH28_17285
   03430 Mismatch repair
    CHH28_17285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsan03032]
    CHH28_17285
   03400 DNA repair and recombination proteins [BR:bsan03400]
    CHH28_17285
Enzymes [BR:bsan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CHH28_17285
    6.5.1.6  DNA ligase (ATP or NAD+)
     CHH28_17285
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CHH28_17285
DNA replication proteins [BR:bsan03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CHH28_17285
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CHH28_17285
DNA repair and recombination proteins [BR:bsan03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CHH28_17285
   NER (nucleotide excision repair)
    Other NER factors
     CHH28_17285
   MMR (mismatch exicision repair)
    Other MMR factors
     CHH28_17285
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_OB_2 DNA_ligase_A_M RNA_ligase
Motif
Other DBs
NCBI-ProteinID: ASP40322
UniProt: A0A222FNP0
LinkDB All DBs
Position
complement(3799055..3799930)
Genome map
AA seq 291 aa AA seqDB search
MRCLGQGGLHMDSLAIVLLLLALCGLSAPLWAAKSPPPVMLAKLYQPGVALQHYLVSEKL
DGVRAYWDGRQLRTRGGYSIAAPRWFTAPLPEHALDGELWLGYGRFAEMSGLVRRHQVDE
QAWRDVRFMLFDMPEMNAGFEQRLWVLTTWTEQMRRSWLQVVPHHRVTGEAELQQRLKAV
VASGGEGLMLRRADASYQAQRSDAMLKLKLDQDDEAKVVAHVPGNGKYHGMLGALLVETD
DGRRFRIGTGFSDEERRNPPPLGSRITFEYNGDTVTGLPRFARFVRVRPPE
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgaggtgcttaggtcaaggagggctgcacatggatagtctcgccattgtgttattgctg
ctggcactgtgcggtcttagtgcaccgctgtgggcggcaaaatctccaccgccagtgatg
ctggccaaactctatcaacctggtgttgctttgcagcactatttggtcagcgaaaaactc
gacggcgtgcgtgcctactgggatggccgccagctacgcacgcgcggtggctattcgatc
gctgccccgcgctggtttactgcaccattgcccgagcacgcgctggatggcgagctgtgg
ctgggctatggccgctttgcagaaatgagcggcctggtgcgacgccatcaagtagatgag
caggcgtggcgtgatgtgcgttttatgctgttcgatatgccagagatgaacgccggattt
gagcagcgactgtgggtgctaacgacctggactgagcaaatgcgccgttcatggttgcag
gtggtgccccatcatcgggtgacgggcgaggcggaattgcagcagcggttaaaagcggtg
gtggcgtcaggcggtgaaggtttgatgctgcgtcgcgccgatgccagctaccaggcacag
cgctccgatgccatgttaaaactgaaactcgatcaagacgatgaagccaaggtggtcgca
catgtgcctggcaatggtaaataccacggcatgctcggcgcgctgttggtagagaccgac
gacggtcggcgatttcgtattggcaccggctttagtgatgaagaacgtcgcaacccacca
ccactgggtagccgcattacttttgaatacaatggcgacacagtcaccggtttgccacgt
tttgctcgcttcgtgcgcgtgcggccgccagaataa

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