Brevundimonas subvibrioides: Bresu_0002
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Entry
Bresu_0002 CDS
T01291
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
bsb
Brevundimonas subvibrioides
Pathway
bsb03030
DNA replication
bsb03430
Mismatch repair
bsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bresu_0002
03430 Mismatch repair
Bresu_0002
03440 Homologous recombination
Bresu_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsb03032
]
Bresu_0002
03400 DNA repair and recombination proteins [BR:
bsb03400
]
Bresu_0002
Enzymes [BR:
bsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bresu_0002
DNA replication proteins [BR:
bsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bresu_0002
DNA repair and recombination proteins [BR:
bsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bresu_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADK99317
UniProt:
D9QHP2
LinkDB
All DBs
Position
1855..2973
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AA seq
372 aa
AA seq
DB search
MQLTIERSALLKALGHVQSVVERRNTIPILSNVLLSAGRDRLSFAATDLDMEIVDEADAT
VQVEGQITAPAHTLYEIVRKLPDGAEVALTYNGDDPRLTVQAGRSKFNLPVLPAGDFPVM
STDQSGARFTLMKDDLARLIDKTRFAVSTEETRYYLNGLYLHTVAEGGIPLLRAVATDGH
RLALAETPAPEGAAGGPGVIVPRKTIDQVRRLLDDGTGPVEISVSPQKIRFEFGQASLTS
KVIDGAFPDYMRVIPKGNDKQADIDNAVFASAVDRVATISAEKSRSVKLAFELDRVTLTV
RNMEAGQGVEEVEIGYSEAPFEIGFNARYLLDVAGQITGENATFLFADPASPTLVLDPGD
PGVQYVLMPLRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaccatcgaacgatccgcgctcctgaaggccctcgggcatgtgcagagcgtg
gtcgaacgccggaacaccattccgatcctgtccaatgtgctgctgtcggcgggccgcgat
cggctgagcttcgccgccaccgatctggacatggagatcgtggacgaggccgacgccacc
gttcaggtcgagggccagatcaccgcccccgcccacaccctgtacgagatcgtgcgcaaa
ctgcccgacggggccgaggtcgccctgacctacaacggcgacgatccgcggctgacggtg
caggcggggcgctccaagttcaatctgccggttctgccggcgggcgacttccccgtgatg
tcgaccgaccagtcgggcgcgcgcttcaccctgatgaaggacgatctggcccgcctgatc
gacaagacccggttcgcggtctcgaccgaggagacgcgctactatctgaacggcctgtac
ctgcacacggtggcggaaggcggcattcccctgctgcgcgccgtggcgaccgacggccac
cgcctggccctggccgagacgcccgcgcccgaaggcgccgccggcggtcccggcgtgatc
gtgcccagaaagaccatcgaccaggtccgccgcctgctggacgacggcacgggcccggtc
gagatctcggtcagcccgcaaaagatccgcttcgagttcggccaggcgtcgctgacgtcc
aaggtcatcgacggcgccttccccgactacatgcgcgtcattcccaaggggaacgacaaa
caggccgacatcgacaatgccgtcttcgcctcggccgtcgaccgcgtggccaccatctcg
gccgagaagagccggtcggtgaaactggccttcgagctggaccgcgtgaccctgacggtg
cgcaacatggaggccggccagggcgtggaggaggtcgagatcggctattccgaagccccg
ttcgagatcggcttcaacgcccgctacctgctggacgtcgccggccagatcaccggcgag
aacgcgaccttcctgttcgcagacccggccagccccacgctggtgctcgatccgggcgat
ccgggcgtccagtatgtgctgatgccgctgagggtctag
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