Bipolaris sorokiniana: COCSADRAFT_191605
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Entry
COCSADRAFT_191605 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COCSADRAFT_191605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsc02000
]
COCSADRAFT_191605
04147 Exosome [BR:
bsc04147
]
COCSADRAFT_191605
04090 CD molecules [BR:
bsc04090
]
COCSADRAFT_191605
Enzymes [BR:
bsc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
COCSADRAFT_191605
Transporters [BR:
bsc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
COCSADRAFT_191605
Exosome [BR:
bsc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSADRAFT_191605
CD molecules [BR:
bsc04090
]
Proteins
COCSADRAFT_191605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_21
AAA_29
AAA_16
Zeta_toxin
SbcC_Walker_B
AAA_28
nSTAND1
APS_kinase
YvrJ
Dala_Dala_lig_N
Motif
Other DBs
NCBI-GeneID:
19133774
NCBI-ProteinID:
XP_007701734
JGI:
Cocsa1_191605
UniProt:
M2S592
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MSPVGQQAPPLESDAQTSEDAKRVTASDGKSDAASKEADGGMGGYVRIFRYADRTSWILN
VIAAIAAVAAGTLLPLMDLVFGKFVSTFTAFGTGTITPAKYRSEVNKFTLYFVYLFIAKF
SLVYIHSTFISIAAIRTTKAVRIDFLKHVIRQNIAYFDSDEAASVTTQATSNGNNVNNGI
SEKLSLTIQGVSTFVTAFIVAFVVQWKLTLITISIIPTIIVVISVCVGIDAKNENQLLSI
QSRAGQLAEEVFSTIRTVHAFWLHPLLSRKYDNILGDAMNVGMKKSPNYAVMFSTEFFCI
YCGYGLAFWQGIRMFARGEIKESGDVFTVILAVIVAATAMTTISPQIMALVKASSSADEL
FKTIDRKSPIDPLSEEGKIPDACNGVIEIKGVSFAYPARPDITVLKDLTVSAPAGKTTAL
VGASGSGKSTIVGLIERWYDQASGMIYLDGTDIRELNLTWLRTNIRLVQQEPVLFSGTIY
ENVAFGLVGTEKANLPQDEQRKLVEKACKDAYAEEFIKRLPKGYDTQLGERAANLSGGQK
QRIAIARSIVSEPTVLLLDEATSALDPKAEKIVQQALERVSQGRTTIVIAHKLSTIRNAD
NIIVMSSGTVVEQGSHEELLAQDGAYARLVRAQDLGQTDSEEHVEQDFATEKVDLERTQT
QVSAINHDDVEQPSKDGTNYNLVTCIWLVLKEVGDVWKCFVLLTVAGVCGGATFPAQAIL
FSRVVGAFQLSPERAVDEGDFYSLMFFIVALGNLAVYSVVGWTSNIVAQVVGRKFRREIF
DLVLKQDMAFFDDQNNASGALVSKLSGYPDHLRDLMGFNLMLICINIVNVVSSSILAISV
GWKLGLVVVFGALPPIVFSGYLRIRLEFKLEELTGKRFAGSAALAAEAVSAIRTVSSLAL
ERHILARYEDCLRHVEKHSIKALIWTMFWYALSQSISFLAMALGFWYGGRLISTGEYTTT
QFFTVFIGVIFSGEAAAGFFSYTTSLTKAATAANYVFWLRRLTPAVEEDPSKPPFDNEKD
KGPAHIKVDDIAFAYVSRPHAKVLEGIDVDVRPGQFIAFVGASGCGKSTMISLLERFYDP
IAGRITCDNRALTELCPRKYRRDVSLVQQEPVLYQGSIRDNIAMGIETDVTDAQIEKTAK
QSNIYDFVASLPDGFATMCGNRGTQLSGGQRQRIAIARALIREPRLLLLDEATSALDTES
ERVVQSALEEAQSGRTTIAVAHRLSTIKDADAIFVFAKGKVVESGTHQELLAKREVYYEM
CLGQSMDRAIPA
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccagtggggcagcaagccccgccactcgaatctgacgcgcaaacaagtgaagat
gctaagagagttacagcttctgacggcaaaagcgatgctgcgtccaaggaggccgatggc
ggtatgggtggctatgtccgcatctttcggtatgcggatcgcactagttggattctgaac
gttattgcggccatcgccgccgtcgctgctggaacactactaccactcatggacctagtc
ttcggaaaattcgtgtccacgtttactgcgtttggtactgggaccatcacgccagctaaa
tatcgttctgaagtgaacaaattcactctgtactttgtatatctcttcattgcgaaattc
agtcttgtctatatccactcgacttttatatcgatagccgcaatacgtaccaccaaggct
gtgcgcatagacttcctcaaacacgtcattcgccaaaacatcgcctactttgattcagat
gaggctgcctcggtcacaacgcaagccaccagtaatggaaataatgtcaacaacggtatt
tccgagaaactttcgctcacaatccagggtgtatcgacattcgtgacagctttcattgtc
gcttttgttgtacagtggaagctcactttaatcacaatcagtatcattccaaccattata
gtcgttatcagtgtctgcgtgggcatcgacgccaagaatgagaaccagttgctatcgatc
caatcaagagctgggcagctagcagaagaagtcttctcaacgatacgcactgttcacgct
ttttggctgcaccctttgttgtcgcgcaaatacgacaatattctcggcgacgcaatgaat
gtagggatgaagaaatctcccaattacgcagtcatgttttccacagagttcttctgtatc
tactgcggctatgggttggccttttggcaaggtatccgaatgtttgctcgaggagagatc
aaagaaagcggcgatgtatttaccgtcatcttagccgtgatagttgccgcaactgcaatg
acaacgatttctcctcaaattatggctttggtaaaggcatcgtcttccgcggatgagctg
ttcaagaccattgaccgaaagtcgccaatagatcctctgagcgaagagggtaaaatacct
gatgcatgcaatggcgtcattgagatcaagggcgtcagctttgcttatccagcaaggccc
gatatcacggtactgaaggacctgactgtatccgcaccagcaggtaaaacgacagcgcta
gttggagcctcgggtagcggcaaatccacaatcgtcggcttgattgagcgttggtacgac
caggctagtggtatgatctacctcgatggtacggacatcagagagttgaatctcacatgg
ctacggacaaacatccgtcttgttcagcaagaaccggttctgttctccgggaccatatat
gagaacgtcgcattcggccttgttggtaccgaaaaggccaatctacctcaggacgagcaa
cggaagctggtagaaaaggcttgtaaagatgcttatgctgaggagtttatcaagagactg
ccaaagggctatgatacgcagcttggtgagcgtgctgcaaatctttcggggggtcaaaag
caacgcatagcgatcgcacgcagcatcgtttcagagcccaccgttctactgctagatgag
gcaaccagcgccttagacccgaaagctgaaaagattgtgcagcaagccctagagcgtgtc
tctcaaggccgcaccacgatcgtcatagcgcataagctctctacaatccgcaatgcagac
aacattatcgtcatgtctagtggcactgtcgtggagcagggctcacatgaagagctcctt
gcgcaagatggagcatacgcacgtcttgtccgagcccaggatcttgggcagactgacagc
gaagaacacgtggaacaagactttgctacagaaaaggttgatctcgaacgcactcagacc
caggtctccgccataaaccatgacgacgttgagcaacccagcaaagatggcaccaactac
aatctagtcacgtgcatatggctggttctcaaagaagtaggcgatgtctggaaatgcttc
gtcttattgacggtagccggtgtatgtggaggggcgacgttccctgctcaagccatacta
ttctcacgcgtcgtcggagcgtttcagttgtcacccgaaagagccgtagacgagggcgac
ttctattccctcatgtttttcatcgttgccttgggtaatctggctgtgtattccgttgtc
gggtggacgagcaacattgtagctcaagtggtaggaaggaagttccgacgcgagatattc
gatctggtcctcaagcaagacatggccttctttgacgaccagaataacgctagtggcgcg
ctcgtttcaaagctctcaggatatcccgaccacttacgcgacctcatgggctttaacctg
atgctgatttgtatcaacatcgttaatgttgtttccagctctattcttgcaatttccgtc
gggtggaagctgggccttgtcgtggtctttggagctctaccaccaatcgtgttttccggc
taccttaggattcgtcttgagtttaaattagaggagctcactgggaaacgttttgctggc
agtgcagcgctcgctgctgaagctgtctccgctattcgcacagtttccagtctcgcactt
gagcgacatattctcgcgcgatacgaagattgtttgcgtcatgttgaaaagcatagcatc
aaggctctgatatggaccatgttctggtatgctctgtcgcaatccatctcattccttgca
atggctttgggtttttggtatggtggtcgcctgatcagtactggcgagtacacaacaacc
caattcttcacagtctttatcggtgtcatcttttccggagaggcagctgcagggttcttt
tcctacacaaccagtctgaccaaggcggcgaccgcggcgaactacgtgttttggctacga
aggctaacaccggccgtggaagaagacccatctaagccaccctttgacaacgaaaaggac
aagggtccggcgcatatcaaagtagatgatattgcgttcgcatacgtgtctcgaccacac
gctaaagttctcgaaggcatcgatgtcgacgtacggcccggccagtttatcgcgttcgtg
ggcgcgtccggttgtggaaagtcaaccatgatatcccttcttgaaaggttttatgaccct
atcgccgggcggataacttgcgacaatcgggccttgacggaactttgcccccgcaaatac
cgtcgtgacgtttcgctggttcaacaagaacccgtgttataccaaggctcgatccgcgac
aacattgctatgggcatcgaaactgatgttacggatgcgcaaattgagaaaacagccaaa
caatccaacatttatgacttcgtcgcatccctgcctgacggcttcgcgaccatgtgtggc
aataggggcacacagttgtctggaggacaacgtcaacggattgcaatagcccgagcttta
atacgcgaaccgcgtcttcttctgcttgatgaagccacatccgcactcgacaccgagtct
gagcgggtagttcaatcggccctagaggaggcacagagcgggcgtacaaccattgcagtg
gcgcaccggctcagtacgatcaaggatgcagatgcaatctttgtttttgccaagggaaaa
gttgtggagagtgggacgcaccaagagttgctcgcgaagagagaagtgtattatgaaatg
tgcttgggtcagagtatggatcgagccataccggcctag
DBGET
integrated database retrieval system
