Bipolaris sorokiniana: COCSADRAFT_91089
Help
Entry
COCSADRAFT_91089 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSADRAFT_91089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_91089
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
COCSADRAFT_91089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
MIOS_WD40
eIF2A
NBCH_WD40
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
19141386
NCBI-ProteinID:
XP_007700519
JGI:
Cocsa1_91089
UniProt:
M2R8X6
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MEREYHRPEFEGGLRPRPKRAVTDYGSTTVQWMRNRRPRYKNVPRPEVERPSASYIVDMQ
PPAARIASAAESIPAKAVHSSLNKVKHPINVVKWTPEGRRLLTGSTSGEFTLWNGMGFNF
ETIMQAHEAAIRAVEYTSTDDWLLSADQTGVVKYWQTNFNNVKEIQAHTEAVRGLAIAPT
DSKFVTCADDTTLKIWDFASSTEESTLTGHGWEVKSVDWHPHKGLLVSGSKDHQVKFWDP
RTGRCLTTLHGHKNPISKTMFEPVQGNMLATCARDHTARIFDIRMMRDVLLLKGHEKDII
TMAWHPMHKNLLSTGGVDGSIHHYLLDEQNPPPGVAPSISPYDAADSQNAPSQTIYPAHS
LQYAHDFTVWTMDWHPLGHILASGSNDRVTRFWTRPRPGDTNYINDRYHIGQAAAEAQGT
FDRSQGRRQKMEEEEQEAEDEAEGLVDQKLPSRNMAGAPFLPPGLSLPGLSAPPDGTSSA
LPGIGGASQHSIHPPPPPPPPAGMPFPPQLNAGGAPIPPPFSGMDPSHIAQLIASGSLPP
PPLPHGHGPPPPQGGNATAPPPFPPPPNFPGFPQGMPPGMPPLPHGMPPPGFPGFPPPPP
PGGLGNAAPPPGWPGQLPVQQPQQQQQQQQQQGFGGGGGQGGAGGGDSLVRKRAPLPDQQ
DALKAEMSQGRYRKAR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgagtaccatcgccccgaattcgaaggcggcttgcgtccccgaccgaaacgt
gccgtcactgactatggctcgacaacggtgcaatggatgcgcaatcggcgcccacggtac
aagaacgtgcccaggccagaggtggagcggccgagtgcaagctacattgtcgatatgcag
cctcctgcagcgcgcatcgccagtgctgccgaatccatacctgcaaaggcagtacattcg
tcactcaacaaagtaaagcatcccatcaacgtagtcaagtggacgccagaggggcggcgc
ctactcacgggctcgactagcggcgagttcacgctgtggaatggcatgggcttcaacttt
gagaccatcatgcaggctcacgaggcagccattcgcgccgtcgagtacacctctactgac
gactggctgctgtctgctgaccagaccggagtcgtcaagtactggcagaccaactttaac
aacgtcaaggagatacaggcgcacacagaggctgtgcgggggctcgcaatagcccccact
gactccaagtttgtcacatgcgccgacgataccacactgaagatctgggactttgcgtca
agtaccgaagagtcgacgctgacaggacatggatgggaagtcaagtcggtcgactggcat
ccgcacaaggggctgctagtatcgggatcaaaggatcaccaggtcaagttctgggatccg
cggacaggccgctgtctgacgacacttcatggacataaaaacccaatatcaaaaaccatg
ttcgagcctgtccaaggaaacatgctagcaacctgcgcccgtgatcacaccgcccgcatc
tttgatatccgaatgatgcgcgatgtcttactgctcaaaggccacgagaaagatattatt
acaatggcgtggcacccaatgcacaaaaacctgttatctacgggaggtgtagatggcagc
attcatcattacctcctcgacgagcagaaccctcccccgggtgttgcgccatcaatatca
ccctacgacgctgcagactcgcaaaatgccccttcgcaaactatatatcccgcacacagc
ctgcaatacgctcacgactttacggtctggaccatggactggcatccgcttggtcatatc
ctcgcctctggctccaatgaccgcgtcactcgtttttggacacgcccccgacctggcgat
acaaactacatcaacgaccggtaccacattggccaagccgcagcagaagcccagggtacc
tttgatcgcagccagggccgacgacagaagatggaagaagaagaacaggaagcagaggat
gaagcagagggcctggttgaccaaaaactcccgtctaggaacatggctggtgcacccttc
cttcccccaggtctctcacttccagggctctctgcaccaccagatggcacttcaagcgct
ctcccaggaattggcggtgcaagccaacattctattcatcctcctccgccaccacctccg
ccggcaggaatgccctttccgccccaactaaacgcaggcggcgcacccattcctcctccc
ttctcaggtatggacccatctcacattgcccaactcattgcctctggctctctgccgccc
cctccgctcccccacggtcacggtccgccgccacctcagggtggaaacgctactgctcct
cctccgtttcctccacccccgaatttccctggtttcccacagggaatgccgccgggtatg
ccgcctcttccccacggtatgcctcctcctggtttccctggctttccacctccaccgcct
cctggtggattgggcaatgctgcgccgccgccgggatggcctggtcaacttccggtgcaa
cagccgcagcaacagcaacaacagcagcagcagcaaggatttgggggtggaggtgggcaa
ggtggtgcaggaggcggcgatagcctggtcaggaagagagcaccattaccggatcagcag
gatgcgttgaaagcagagatgagtcaggggaggtataggaaggcgaggtag
DBGET
integrated database retrieval system
