Bifidobacterium scardovii: BBSC_0888
Help
Entry
BBSC_0888 CDS
T03975
Name
(GenBank) ABC transporter permease and ATP-binding components
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BBSC_0888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsca02000
]
BBSC_0888
Transporters [BR:
bsca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BBSC_0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_16
DUF87
ABC_membrane_3
SRP54
AAA_25
AAA_29
AAA
ABC_ATPase
AAA_28
Zeta_toxin
MMR_HSR1
TsaE
RsgA_GTPase
NACHT
AAA_5
AAA_7
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAQ30968
LinkDB
All DBs
Position
1058535..1060415
Genome browser
AA seq
626 aa
AA seq
DB search
MSDRKAQSAQSTQSAQSAGEPFPGTGGFGGQRPGQPPQMGGGMARRGAAVVKPKDMRGTL
RRLYDITRGHRQGLGWVFALSGLSSASAVLSPLLVGLVVNAIAAGDPVAMALALLAAVYL
LDWLVNFGQQYLMAAAGQRIVLHLRMSLFDALATLPLRFFDRHQHGELMSRLTNDVDNIS
TTISDSLAQLMVYAFTIAGTLVCMLALSPVLTVVSLLPVALVFILTKVVTTRTRPLYARQ
QQVLGRLDGLVEESVSGLTMVKAYGREERMIADFEKLNDELCDTGVRAQTWSGYLMPLSN
VINNLGFLLVAVISGLMAVRGWIGVGVIASFLLYVRQFSRPFVDIANIYNTFQTAVAGAE
RIFQIMDEEPEPADRADALPLDSPRGDIAFDHVRFGYDPGNPVIHDLTLAIPAGTRVAFV
GETGSGKTTLVNLLARFYDPDAGRILLDGHDLRDYRLADLRAAFGTVLQDPSLFEDTVAA
NIAYGRPGAGMDAIRVAAKAAGADAFIERLPEGYGTMLEGGGAALSQGERQLLTIARALL
ADAPIVILDEATSAVDTVTEAAIRDAMLAMTAGRTSFVIAHRLSTIRDSDLIVVIEHGRI
AEQGTHESLMAAHGIYARMVADQSGR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgcaaagcacagtcggcgcaatccactcagtcggcgcaatccgccggggag
cctttccccggtaccggcggcttcggcgggcagcgccccggccagcccccgcagatgggc
ggcggcatggcccggcgtggggccgccgtcgtcaagcccaaggacatgcgtggcacgctg
cgccggctctacgacatcacgcgcggccatcgccaaggattgggatgggtgttcgcgctg
tccgggctgtcctccgcctcggcggtgctttcgccgctgctcgtcgggctggtggtcaac
gccatcgcggcaggcgacccggtcgccatggcgcttgccctgcttgccgcggtgtacctg
ctggactggctggtcaatttcggccagcagtacctcatggccgcagccgggcagcgcatc
gtgctccacctgcgcatgtccctgttcgatgccctcgccacgctgccgctgcgcttcttc
gaccggcaccagcacggcgagctgatgagccgcctgaccaacgacgtggacaatatatcc
accacgatctccgattcgcttgcgcaactcatggtgtacgcgttcaccatcgccggcacg
ctcgtctgcatgctggcgctcagtccggtgctcaccgtggtgtcgctgctgcccgtggcg
ctggtcttcatcctgaccaaggtcgtcaccacacgcacccgcccgctgtacgcgcgccag
cagcaggtgcttggacggctcgacggtctggtggaggagagcgtgtccgggctcacgatg
gtcaaggcctacgggcgcgaggagcggatgatcgccgacttcgagaagctcaacgacgag
ctgtgcgacaccggcgtccgcgcgcagacctggtccggatacctgatgccgctgtcgaac
gtgatcaacaacctcggctttctgctcgtggcggtgatcagcgggttgatggccgtgcgc
ggctggatcggcgtcggcgtgatcgccagcttcctgctgtacgtacggcagttctcccgt
ccgttcgtggacatcgcgaacatctacaacaccttccagaccgcggtggccggagccgaa
cgcatcttccagatcatggacgaggagccggagcccgccgaccgggcggacgcgctgccg
ctggacagcccgagaggcgacatcgcgttcgaccatgtgcgcttcggctacgaccccggc
aatccggtgatccacgacctgacccttgcgatccccgccggcacgcgcgtagcgttcgtg
ggggagaccggttcgggcaagaccacgctggtcaacctgctcgcccggttctacgatccg
gatgccggccgcatcctgctcgacgggcacgacctgcgcgactaccggctggccgatctg
cgcgccgccttcggcacggtgctgcaggatccgtccctgtttgaggacaccgtcgccgcg
aacatcgcctacgggcggccgggagcgggcatggacgcgatccgcgtcgcggcgaaggcg
gcgggagccgacgcgttcatcgaacggctgccggagggctacggcacgatgctcgaaggc
ggcggggctgcgctgagccagggcgagcgccagctgctcaccatcgcccgcgcgctgctc
gccgacgcgccgatcgtcatcctcgacgaggcgaccagcgcggtggacaccgtcaccgag
gccgcgatccgcgacgcgatgctggcgatgaccgccgggcggaccagtttcgtcatcgcg
caccgcctgtccaccatccgcgattccgatctcatcgtggtcatcgagcacgggcgcatc
gccgaacagggcacgcatgagtcgctgatggccgcgcacggcatctacgcgcgcatggtc
gccgatcagagcggacggtga
DBGET
integrated database retrieval system