KEGG   Bifidobacterium scardovii: BBSC_0888
Entry
BBSC_0888         CDS       T03975                                 
Name
(GenBank) ABC transporter permease and ATP-binding components
  KO
K18888  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
bsca  Bifidobacterium scardovii
Pathway
bsca02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:bsca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    BBSC_0888
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bsca02000]
    BBSC_0888
Transporters [BR:bsca02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    BBSC_0888
SSDB
Motif
Pfam: ABC_membrane ABC_tran AAA_22 SMC_N AAA_16 DUF87 ABC_membrane_3 SRP54 AAA_25 AAA_29 AAA ABC_ATPase AAA_28 Zeta_toxin MMR_HSR1 TsaE RsgA_GTPase NACHT AAA_5 AAA_7 AAA_23
Other DBs
NCBI-ProteinID: BAQ30968
LinkDB
Position
1058535..1060415
AA seq 626 aa
MSDRKAQSAQSTQSAQSAGEPFPGTGGFGGQRPGQPPQMGGGMARRGAAVVKPKDMRGTL
RRLYDITRGHRQGLGWVFALSGLSSASAVLSPLLVGLVVNAIAAGDPVAMALALLAAVYL
LDWLVNFGQQYLMAAAGQRIVLHLRMSLFDALATLPLRFFDRHQHGELMSRLTNDVDNIS
TTISDSLAQLMVYAFTIAGTLVCMLALSPVLTVVSLLPVALVFILTKVVTTRTRPLYARQ
QQVLGRLDGLVEESVSGLTMVKAYGREERMIADFEKLNDELCDTGVRAQTWSGYLMPLSN
VINNLGFLLVAVISGLMAVRGWIGVGVIASFLLYVRQFSRPFVDIANIYNTFQTAVAGAE
RIFQIMDEEPEPADRADALPLDSPRGDIAFDHVRFGYDPGNPVIHDLTLAIPAGTRVAFV
GETGSGKTTLVNLLARFYDPDAGRILLDGHDLRDYRLADLRAAFGTVLQDPSLFEDTVAA
NIAYGRPGAGMDAIRVAAKAAGADAFIERLPEGYGTMLEGGGAALSQGERQLLTIARALL
ADAPIVILDEATSAVDTVTEAAIRDAMLAMTAGRTSFVIAHRLSTIRDSDLIVVIEHGRI
AEQGTHESLMAAHGIYARMVADQSGR
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgagcgatcgcaaagcacagtcggcgcaatccactcagtcggcgcaatccgccggggag
cctttccccggtaccggcggcttcggcgggcagcgccccggccagcccccgcagatgggc
ggcggcatggcccggcgtggggccgccgtcgtcaagcccaaggacatgcgtggcacgctg
cgccggctctacgacatcacgcgcggccatcgccaaggattgggatgggtgttcgcgctg
tccgggctgtcctccgcctcggcggtgctttcgccgctgctcgtcgggctggtggtcaac
gccatcgcggcaggcgacccggtcgccatggcgcttgccctgcttgccgcggtgtacctg
ctggactggctggtcaatttcggccagcagtacctcatggccgcagccgggcagcgcatc
gtgctccacctgcgcatgtccctgttcgatgccctcgccacgctgccgctgcgcttcttc
gaccggcaccagcacggcgagctgatgagccgcctgaccaacgacgtggacaatatatcc
accacgatctccgattcgcttgcgcaactcatggtgtacgcgttcaccatcgccggcacg
ctcgtctgcatgctggcgctcagtccggtgctcaccgtggtgtcgctgctgcccgtggcg
ctggtcttcatcctgaccaaggtcgtcaccacacgcacccgcccgctgtacgcgcgccag
cagcaggtgcttggacggctcgacggtctggtggaggagagcgtgtccgggctcacgatg
gtcaaggcctacgggcgcgaggagcggatgatcgccgacttcgagaagctcaacgacgag
ctgtgcgacaccggcgtccgcgcgcagacctggtccggatacctgatgccgctgtcgaac
gtgatcaacaacctcggctttctgctcgtggcggtgatcagcgggttgatggccgtgcgc
ggctggatcggcgtcggcgtgatcgccagcttcctgctgtacgtacggcagttctcccgt
ccgttcgtggacatcgcgaacatctacaacaccttccagaccgcggtggccggagccgaa
cgcatcttccagatcatggacgaggagccggagcccgccgaccgggcggacgcgctgccg
ctggacagcccgagaggcgacatcgcgttcgaccatgtgcgcttcggctacgaccccggc
aatccggtgatccacgacctgacccttgcgatccccgccggcacgcgcgtagcgttcgtg
ggggagaccggttcgggcaagaccacgctggtcaacctgctcgcccggttctacgatccg
gatgccggccgcatcctgctcgacgggcacgacctgcgcgactaccggctggccgatctg
cgcgccgccttcggcacggtgctgcaggatccgtccctgtttgaggacaccgtcgccgcg
aacatcgcctacgggcggccgggagcgggcatggacgcgatccgcgtcgcggcgaaggcg
gcgggagccgacgcgttcatcgaacggctgccggagggctacggcacgatgctcgaaggc
ggcggggctgcgctgagccagggcgagcgccagctgctcaccatcgcccgcgcgctgctc
gccgacgcgccgatcgtcatcctcgacgaggcgaccagcgcggtggacaccgtcaccgag
gccgcgatccgcgacgcgatgctggcgatgaccgccgggcggaccagtttcgtcatcgcg
caccgcctgtccaccatccgcgattccgatctcatcgtggtcatcgagcacgggcgcatc
gccgaacagggcacgcatgagtcgctgatggccgcgcacggcatctacgcgcgcatggtc
gccgatcagagcggacggtga

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