Bacillus siamensis: CWD84_12960
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Entry
CWD84_12960 CDS
T06647
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bsia
Bacillus siamensis
Pathway
bsia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWD84_12960 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsia03019
]
CWD84_12960 (pnp)
03016 Transfer RNA biogenesis [BR:
bsia03016
]
CWD84_12960 (pnp)
Enzymes [BR:
bsia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CWD84_12960 (pnp)
Messenger RNA biogenesis [BR:
bsia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CWD84_12960 (pnp)
Transfer RNA biogenesis [BR:
bsia03016
]
Prokaryotic type
tRNA degradation factors
CWD84_12960 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AUJ77660
UniProt:
A0A268DXF2
LinkDB
All DBs
Position
complement(2541730..2543853)
Genome browser
AA seq
707 aa
AA seq
DB search
MGQEKHVFTIDWAGRQLTVETGQLAKQANGAVMVRYGDTAVLSTATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQNCSSEMAAMFGSSLALCVSDIPFEGPIAGVTVGRIDGEFIINPTVDQLEKSDINLIVA
GTKDAINMVEAGADEVPEEIMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKTEIALYEIDA
ELSEKVKSLAEPDLLSAIQVHEKHAREDAISKVKDAVVAKFEEEEHDEDTIKKVKQTLSK
LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPNEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEYYTVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLS
TLGESRKELSQYAPKILTMTINPDKIRDVIGPSGKQINKIIEDTGVKIDIEQDGTIFISS
TDESSNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLVHISELALERV
GKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEKEQEQQQS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagagaaacatgtctttaccatagattgggccggcagacagcttacagtagaa
accggccagcttgccaaacaggcaaacggcgctgttatggtccgctacggcgataccgca
gtgctcagcacagcaaccgcatcaaaagaaccgaaaccgctagattttttcccgcttacc
gttaattatgaagaaagattatacgcagtcggtaaaattccgggcggctttattaaaaga
gaaggccgtccgagtgaaaaggccgttttagccagccgtctgattgaccgcccgatccgc
ccgcttttcgcagacggattccgtaacgaagtacaggtcatcagcattgtcatgagtgtc
gatcaaaactgctcatctgaaatggctgcaatgttcggctcatcacttgctctttgcgtt
tccgatattccgtttgaaggcccgattgcgggtgtgacggtaggccgcattgacggggag
ttcatcatcaatccgacggttgaccagcttgaaaaaagtgatattaaccttatcgtcgca
ggcacaaaagacgccatcaacatggtggaagcgggagcggatgaagttcctgaggaaatc
atgcttgaagcgattatgttcggccacgaagaaattaagcgcctgatcgctttccaagaa
gaaattgttgcggcagtcggcaaagaaaaaacggaaatcgcactgtatgaaattgacgca
gagctcagcgaaaaagtaaaaagtcttgcggagccggatctgctcagcgccattcaagtt
catgaaaagcatgcgcgcgaagatgcgatcagtaaagtgaaagatgcagtcgtcgcgaaa
tttgaagaagaagagcacgatgaagatacgatcaaaaaagtgaaacagacactgtctaaa
cttgtgaaaaacgaagtgcgccgtttgatcacagaagaaaaagtccgtcctgacggccgc
ggcgtcgatcaaatccgcccgctttcttcagaagtcggccttctgccgagaacgcatggc
tcagggctgtttacgagaggacagacccaggcgctcagcgtatgtacattaggcgctctt
ggcgacgttcagattcttgacggtttaggcgtggaagaatcaaaacggtttatgcatcat
tataacttcccgcaattcagcgtaggggagacaggcccgatgcgcggaccgggacgccgt
gagatcggtcacggggctcttggagagcgtgcgcttgagccggtcattccgaatgaaaaa
gacttcccgtatacggttcgcctcgtatccgaagtgcttgaatcaaacggttccacttca
caggccagcatttgcgcgagcacgcttgccatgatggacgccggtgttccgattaaagcg
cctgttgcaggtatcgcaatgggacttgtgaaatcaggcgagtactacacagtattaacg
gatattcaaggaatggaagatgccctcggtgacatggactttaaagtagccggtacggaa
aaaggcgtaacagcgctgcaaatggacattaaaatcgaaggcctttcaagagaaatcctt
gaagaagcgcttcagcaggcgaaaaaaggaagaatggaaatcctgaacagcatgctcagc
acgcttggtgaatcaagaaaagaactttctcaatatgcaccgaaaattttaacgatgaca
atcaatccggataaaatccgtgacgttatcgggccgagcggcaaacaaatcaacaaaatc
attgaagataccggtgttaaaattgacattgaacaagacggcaccatctttatttcttct
actgatgaaagcagcaaccaaaaagcgaaaaaaatcatcgaagatcttgtcagagaagtc
gaagtcggccagctttacctcggtaaagtcaaacggattgaaaaattcggcgctttcgtt
gaaatcttcagcggaaaagacggtctcgttcacatctctgaacttgcgctcgaacgggtc
ggcaaggttgaggatgttgtgaaaatcggtgacgaaatccttgtgaaggtaacggaaatt
gacaaacagggacgtgtcaacctgtcgcgtaaagcagtactgcgcgaagagaaagaaaaa
gagcaggaacaacaacaatcttaa
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