Peribacillus simplex: UP17_05705
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Entry
UP17_05705 CDS
T04304
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bsj
Peribacillus simplex
Brite
KEGG Orthology (KO) [BR:
bsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsj03400
]
UP17_05705
Enzymes [BR:
bsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UP17_05705
DNA repair and recombination proteins [BR:
bsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
UP17_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AMM92098
UniProt:
A0A9W3WKN8
LinkDB
All DBs
Position
1209600..1213334
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AA seq
1244 aa
AA seq
DB search
MSKMKIPALPGDVTWTEDQWKAIWAKDQDILVAAAAGSGKTAVLVNRIIQKVISEEDLID
VDELLVVTFTNASAAEMRHRVSEALEKAINENPHSQHLRKQLSLINRASISTLHSFCLEV
IRKYYYLTEIDPGFRIADSTEIQLLRDEVMEELFEEQYGQNDNDEFFNLVDAFTSDRNDD
ALQNIVRSLHDFSQSNPDPDRWLDGAASMYELADDDGIDDLSFIDSLKFDIGLQLDTARD
LLERSLALTKVPGGPAPRAENYLADLTLVAKLSEVKDQSWNSLYEEIQNVKFGTAKRLTG
EDFIKEVSDEATKYRDKAKKIIKSLQEELFSRKPESYLRDIRELKGYVDTLVMLVKQFDD
RFFAAKAEKNLVDFADLEHYCLRILTGEIVDGERKPSAAAIEYRNQFKEVLVDEYQDTNL
VQESILKLVTADGEYNGNLFMVGDVKQSIYRFRLAEPNLFLGKYTRFTHDGVESGLKIDL
NRNFRSRKEVLDGTNFLFQQLMGITVGEIDYDEDAQLKKGAPYPEDDPNPIELHLIDGTA
DSGTLSEMEGSDGGFEAEELEKAQLEARQMAKLIKKAIGEKHRIYDTKTKKYRSATYRDM
VILLRSMPWAPQIMEEFKKQGIPVYANLSTGYFEATEVAIMISLLKVIDNPQQDIPLASV
LRSPIVGLDEEEMSQVRLFHTGSYYEALADFYRKSDPEEHPGLYEKASTFYKKLVKWRKL
ARQEALSDLIWLLYRETQFYDFAGGMPGGKQRQANLRALYDRARQYEASSFRGLFRFLRF
IERMQERGDDLGAARALGEQEDVVRLMTIHSSKGLEFPIVFLAGLSKQFNMMDIRKPYLL
DKDYGFAAKYVNSELRITYPSLPQLAFKKKKQLELIAEEMRVLYVALTRAKEKLYLIASI
NDAEKTQQNWESNAAHGDWLLKDYVRAGAKSYLDWIGPSLVRHRDSLGAAGLGLEMESHP
SNWSISVIPSEELAVLDEEEALVQEQILDHVQKSEKVAMVSEFYDDIKKQLEWVYPEHEA
TVYRSKQSVSELKRQYELKDEQSSTELLRKFKRPITKRPTFMQEKSLTPAERGTITHLVM
QHIDLSKEITIQSIQELIVDLIQRELLTEEQKEAVDPETIVDFFDSEIGQRMQKALSIRR
EVPFTMSVPAKEAYSDWATGDEEILIQGVIDCIFEDEQGLVLLDYKTDTITGRFASGYEG
AKEILADRYRMQLQLYTRAVEGILNKKVTSRYLFFFDGSHLLEL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatgaaaatccctgctctgccaggagacgtgacctggacggaagatcagtgg
aaggcgatatgggctaaagatcaggacattctggttgcggcggctgcaggttcagggaaa
actgcggtgctggtcaatcggatcatccaaaaagtcatttcagaagaagatctaatcgat
gttgatgaactgctcgtcgttacattcaccaatgcttcggctgccgagatgcgccatagg
gtaagcgaggcattagaaaaagcgatcaatgaaaatccgcattcacagcatctgcggaag
cagttgagcttgattaatcgcgcttcgatttccacacttcattccttttgtttagaggtg
atccggaagtattattacctgacggaaatcgacccaggcttccggattgcagactctaca
gagatccagctactccgtgatgaagtgatggaagaacttttcgaggaacagtatggccaa
aatgataatgatgagttctttaatttggtggatgcttttacaagcgatcgaaatgatgat
gcacttcagaatatagttcgatcgctgcatgacttttcgcaatcgaaccctgacccggac
agatggctcgatggtgcagcaagcatgtatgaattggctgatgatgatgggattgatgat
ctttcgtttatcgattcattgaaattcgatattggtttacaactggacactgccagggat
ttattggaacggtcgcttgcgttgacaaaagtccctggggggccggcaccaagggctgag
aattatttagccgatttgacattggttgcaaaactttcggaagtgaaagaccaatcctgg
aattctctttatgaagaaatccaaaacgtgaaatttggaacggcaaaacggcttactggt
gaagattttatcaaggaagtatcggatgaggctaccaagtatcgcgataaggcaaagaag
atcatcaaatcgttacaggaagagttattttcccgaaaaccggaaagttatctgcgcgat
ataagggagctcaagggttatgtcgatacacttgtaatgcttgttaaacagtttgacgat
cgattctttgctgcaaaagcagaaaagaacttagttgactttgctgatttggaacattat
tgtcttcggattttgacaggggagattgtggatggcgaacgaaaaccttcagcggcggcc
atcgaatacaggaatcagttcaaagaggttctcgtagatgagtatcaggatacgaacctt
gttcaggaatccattttaaaactggtgacggctgacggcgaatataatgggaatctgttt
atggtaggcgatgtcaagcagtccatttaccgcttcaggcttgcggaaccgaatctcttc
cttggaaaatacacacgttttacccatgatggtgttgaatccggacttaaaatagattta
aaccgcaatttcaggagccgaaaggaagttctcgatgggacgaacttcttgtttcaacag
ttgatgggcattacagtcggtgagattgattatgatgaagatgcccaattgaagaaaggt
gccccatatcccgaagacgatccaaacccaattgaactccatttaattgatggaacagcc
gattcgggaactctttcggaaatggaaggatcggatggcgggtttgaggctgaggaactt
gaaaaagcgcagcttgaagcaaggcaaatggctaagctcattaaaaaggctataggcgaa
aagcatcggatatatgatacgaaaaccaaaaagtacagatctgccacatatcgtgacatg
gtcattcttcttcgctcgatgccatgggcaccgcaaatcatggaggaatttaaaaagcag
gggattccagtctatgccaatttgtcgacagggtattttgaagcgaccgaagtggccatc
atgatttccttattgaaggtgattgataatccgcagcaggatatcccattggcttccgtt
ctccgttcacctatagtcgggctggatgaagaagaaatgtcacaggtgcgtttattccat
acagggagctactacgaagcattagctgatttttacagaaagagtgacccggaagaacat
cccgggctttatgaaaaagcctcaactttttataaaaagctagtaaagtggaggaagctt
gccaggcaggaagcattatcagatttgatctggcttctatatcgcgaaacgcagttttat
gattttgcaggagggatgccaggtggcaaacagcgccaggccaatttaagagcgctgtat
gacagggcaaggcaatatgaagcaagttcattccgcggtctgttccgtttcctgcgtttc
atagaaaggatgcaagaacgtggagatgatctaggggcagcccgggctttaggggaacag
gaagatgtagtccgcctgatgacgattcactcgtcaaagggccttgagttcccgatcgtg
tttcttgccggtctttccaagcaattcaatatgatggatatacgcaagccgtatttactg
gataaggattatggctttgctgctaagtatgtgaattccgaattacggataacttatcca
tccctccctcaattggcttttaagaaaaaaaagcagcttgaattaattgccgaggagatg
cgtgtcctctacgtggcgcttactagagctaaagaaaagctttatttaattgccagcatc
aatgatgcagaaaaaacgcagcagaactgggaaagtaatgcggcacatggagattggctt
ttaaaggactatgtacgggcaggtgcaaaaagctatctggattggattggtccatccctt
gtccggcatcgggattcccttggtgctgcaggccttggcttggaaatggagtcgcatcca
tcgaattggtccatttccgtcattcctagtgaagaacttgctgtcctggatgaggaagag
gcactggtacaggagcaaatactcgatcatgtccaaaaatcagagaaggtcgcgatggtt
tccgaattttatgatgatatcaaaaaacagctcgaatgggtgtaccccgagcatgaggcg
acggtttatcgttccaaacaatccgtttctgaactaaaacgtcaatatgaattgaaggac
gagcaaagctccacggagttgttacgtaaatttaaacgtcccatcacgaagcgtccgact
ttcatgcaagaaaagtcactgacacctgctgaaaggggtacgattacacatttagtcatg
cagcatattgatctatctaaagagattaccattcaatcgattcaggaactgatcgttgac
ttgattcaacgtgagttgttgacggaggaacagaaagaagctgtggatccggaaacgatt
gtcgatttctttgacagtgaaatcggccaaagaatgcaaaaggccttgagtattcgccgt
gaagtgccatttacgatgtcggtgcctgcaaaagaggcttacagcgattgggcaactggc
gatgaggagatccttatccaaggtgtgattgattgtatctttgaggatgaacaaggtctt
gtgctactcgattataaaacggatacaatcactggccgttttgctagcgggtatgaaggg
gctaaagaaatccttgccgatcgataccggatgcagcttcagctatatacgagagctgtt
gaagggatattgaataagaaagtaaccagccgttacttgtttttctttgacggatcgcat
ttattggaattataa
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