Peribacillus simplex: UP17_24855
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Entry
UP17_24855 CDS
T04304
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsj
Peribacillus simplex
Pathway
bsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UP17_24855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsj03019
]
UP17_24855
03009 Ribosome biogenesis [BR:
bsj03009
]
UP17_24855
Enzymes [BR:
bsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UP17_24855
Messenger RNA biogenesis [BR:
bsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UP17_24855
Ribosome biogenesis [BR:
bsj03009
]
Prokaryotic type
rRNA helicases
UP17_24855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrD-helicase
AAA_19
RHSP
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AMM95281
UniProt:
A0A9W3RME7
LinkDB
All DBs
Position
complement(5303483..5304931)
Genome browser
AA seq
482 aa
AA seq
DB search
MNELNFTDYTLSDEIVRALESLGYQRPTEVQREVIPVALKRQDLVVKSQTGSGKTAAFGI
PICEMVDWEENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVYGKHPFALQKAELK
QKSHVVVGTPGRVLDHIEKGTFVLERLTHLVIDEADEMLNMGFIDQVEAIIKELPKERVT
MLFSATLPESIKKLCKQYMKDPLDIEIKAKGLTTEKIEHALIEVREDDKFSLLRDVTITE
NPDSCIIFCRTKDRVDQVCEMLMDQEYPCDMIHGGMLQEDRLAVMNEFRRGEFRYLVATD
VAARGIDIDNITHVINYDLPLEKESYVHRTGRTGRAGKKGKAITFVTPYEDKFLTEIQGY
IGFEIPKMPVPSKEDVSNKKMDFEAKLEARPKIKKDKSEKLNKQIMKLYFNGGKKKKIRA
VDFVGTIAKIDGVNAEDIGIITIQDNVSYVEILNEKGPLVLKVMKNTKVKGKLLKVSEAF
KN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattgaattttactgattatacattaagtgatgaaattgtaagggcattagaa
agcttgggttaccaacgtccaaccgaagtacagcgcgaagtgattccagtggcattgaaa
aggcaggatcttgtcgtaaaatcccaaacaggcagtggcaagaccgctgcattcggcata
ccgatatgcgaaatggtcgattgggaggagaataagcctcaggcgcttattttaacaccg
acacgtgagcttgctgtacaggtaaaagaggatattacgaatattggcagatttaaacgg
ataaaggcaacggcggtttatggaaaacatccattcgctttgcaaaaagcggaattgaaa
caaaagagccatgtagtcgttggaaccccggggcgtgttctggatcatatcgagaaaggg
acattcgtcctggaacgtttaactcatttagttattgatgaagcggatgaaatgctgaat
atgggcttcattgatcaagtggaggccatcattaaagagcttcctaaagaaagagtaacc
atgctgttctccgctacgttacctgagagcataaaaaagctttgtaagcagtatatgaaa
gatcctttggatattgaaatcaaggctaaggggttaacgaccgaaaaaattgaacatgct
cttattgaagtgagagaggatgataagttttccctgcttagagatgtaaccatcacggaa
aaccccgatagctgcatcattttctgtcggacgaaagatagggtcgaccaagtatgtgaa
atgctaatggatcaggaatatccttgtgatatgattcacggcggcatgcttcaggaagat
cgtcttgcagtgatgaatgaattcagaagaggtgaattccgctatttggttgcgacagat
gttgctgcacgcggaattgacatcgacaatataacccatgtgattaactatgacctgcca
ttggaaaaggaaagttacgtacatcgaactggaagaacgggccgtgcaggtaaaaaagga
aaagccattacttttgtgacgccgtacgaagacaaattccttactgagattcaaggatat
atcggttttgaaatccctaagatgcccgttccatcaaaagaggatgtctccaataaaaaa
atggatttcgaagcaaaactggaagctcgtccaaagataaaaaaagataaaagtgaaaaa
ttgaataaacaaatcatgaagctgtattttaatggcggaaagaaaaagaaaatcagggct
gttgattttgtcggaactatcgcaaagattgatggagtgaatgctgaggatatcgggatc
attacgattcaggataatgtttcttatgtggaaatattgaatgaaaagggaccgcttgtc
ttgaaagtgatgaaaaatacgaaagtaaaagggaaacttttgaaggtttcagaggccttt
aagaactaa
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