Bacillus smithii: BSM4216_0212
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Entry
BSM4216_0212 CDS
T03984
Name
(GenBank) helicaseUvrD/Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsm
Bacillus smithii
Pathway
bsm03420
Nucleotide excision repair
bsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSM4216_0212
03430 Mismatch repair
BSM4216_0212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsm03400
]
BSM4216_0212
Enzymes [BR:
bsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSM4216_0212
DNA repair and recombination proteins [BR:
bsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSM4216_0212
MMR (mismatch excision repair)
Other MMR factors
BSM4216_0212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
SLFN-g3_helicase
DEAD
PhoH
AAA_30
AAA_11
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKP45581
UniProt:
A0A0H4NUX4
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All DBs
Position
1:181343..183685
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AA seq
780 aa
AA seq
DB search
MNTELRREQERLDSIMEIIAEQIGMLEDETLRRRKEVIDTCKHFWDDVKVNTDTFDDYLE
TIIALRQQAQNLSVSQSTHRQSFKRLATLRRMQEVPYFGRIDFTEEGDSVAERIYIGIST
LTDTSGENILIYDWRAPVSSVYYDYAPGPAEYATPGGVIRGTLEKKWQYIIRNGVIQSMF
DTSLTIGDEILQQVLGRVTDKHMHNIVATIQMEQNRIIRHDRGRMLIVQGPAGSGKTSAA
LQRIAYLLYKYRDRLKADQIILFSPNSMFNSYVSNVLPELGEENMQQVTFQEYLDHRLSK
AFQVEGPYEQLEYVLTAANDPSYRTRMANIRFKASTRFFEAIKGYWKSLASSGMLFKDIL
FRGKPIVTAKQIAERFYSSDTSFRFHNRLEKLTEWLNKQIDEAEKIERTKPWVQEEIELL
SNEDYHKAYTHLRKKRRFKGESLDNYEIETEAIGELIVRKKLKPLRKRIRALRFIDFKGI
YKQLFTDPTQIKLWLEGETPGEWEDICRLTVKMLDEGKLFYEDATPFLFLKDLIQGFQTN
ISIKHVLVDEAQDYSSFQFEYLKCLFPSARMTVLGDFNQAIFAHASETGDFQTLTDLYGT
DETDVITLNRSYRSTRQIVEFTRGLVPGGERIVAFERDGDKPVLTRVSDHAELHRCIASK
VAELRNRGYNTIAIICKSAAESTAAYEALKSVEEVKLVKSGYAEYEQGVVVIPAYLAKGI
EFDAVIIYDASAQVYGDESLRRLFYTACTRAMHHLELYSVGEPSPFLSNVAPESLLLIQG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacagaacttcggcgggagcaagaacgattggacagcataatggagatcattgcg
gagcaaatcggcatgctggaagatgaaacccttaggcgcaggaaagaagtgattgatacg
tgcaaacatttttgggatgacgtcaaggtgaatacagatactttcgacgattatcttgag
acgatcatcgccttgagacaacaggctcagaatctgtccgtcagccaaagcacccacaga
caatccttcaagaggttggccacgctgcgccgcatgcaggaggtgccttatttcggacgg
atcgatttcactgaagaaggggattccgtcgccgaacgaatctatatcggtatttccacg
ctcacggatacaagcggagagaacatccttatctacgactggcgggcgccggtctcgagt
gtctactacgattacgcacccggtccggccgaatatgctacacctggaggcgtaattcgc
ggcacgctggagaaaaaatggcaatatatcatccgcaacggcgttatccaatcgatgttc
gataccagtctcaccattggagacgagattttacagcaggtgcttggcagagtcacggac
aaacatatgcacaatatcgtggctactattcaaatggaacaaaaccggattatccggcat
gatcgcgggaggatgctcattgtgcaaggccccgctggcagcggcaagacatctgccgcc
cttcagcggatcgcttacttgctctacaagtaccgggacaggctgaaggccgatcaaatc
attttattttcaccgaattcgatgtttaatagctacgtgtccaatgtgttgcccgaactc
ggcgaagagaatatgcaacaggtcacatttcaggaatacttggaccatcggctgagcaaa
gcatttcaagtcgagggtccatacgagcaactggaatatgtgttgactgcagcaaatgac
ccttcataccggaccaggatggcgaacatccgattcaaggcatcaactcgttttttcgag
gcgattaaaggatactggaagtcgctggcgtcctccggcatgctattcaaagatattcta
tttagaggaaaaccgatcgtcaccgccaaacaaattgcggaaaggttttacagcagcgac
acctcgttccgctttcacaacagacttgaaaagctgacggaatggctaaacaagcaaatc
gatgaagcggagaaaattgaacggaccaagccatgggtacaagaagaaatcgagctgctt
agcaacgaggattaccataaagcttacactcatttacggaaaaaacgtcgctttaaagga
gaatcgttagacaattatgagattgagaccgaagcgattggcgaattgatcgtccgcaaa
aaattgaagccgttgcgcaaacggatccgggcgcttcgtttcatcgactttaaagggata
tacaagcagcttttcaccgatccgacgcagatcaaactgtggttggagggggaaacccct
ggggagtgggaggatatttgccgattgacggtgaaaatgctagacgaaggcaaactgttt
tatgaagatgcaactccgtttttattcttgaaagatctgattcaaggctttcagacgaac
atctcgatcaaacacgtgcttgtagacgaagcacaagattattcttcgtttcaattcgag
tatttgaaatgtttgtttccctcggcaaggatgaccgtgctcggcgactttaaccaggcg
atcttcgcccatgccagcgaaacgggcgattttcaaacactgaccgacttatacggaacg
gatgaaacggatgtgatcaccttgaatcgcagctacagatccacaagacagatcgtcgaa
tttacgcgcggactcgtgcccggcggcgaacggattgtcgcttttgagcgcgacggtgat
aagcctgtgctgacgagagtttctgatcatgcagaactgcaccgctgtattgcttccaaa
gtcgcagaattgcggaatcgggggtataatacgatcgcgatcatatgcaaatctgctgcg
gaaagcaccgccgcatacgaagcactgaagagcgttgaagaagtgaagctcgtgaagagc
ggctatgccgaatatgaacaaggcgttgtcgtcataccggcgtatttggccaagggcatt
gaattcgacgccgtcatcatttatgacgcatcggcgcaagtatacggtgatgagagcctg
cgcagattgttctacaccgcctgtacacgggctatgcatcatttggagctttatagtgta
ggcgaaccgagcccctttttgagcaatgttgcgccggaaagtttacttctgatccagggt
taa
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