Bacillus smithii: BSM4216_3511
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Entry
BSM4216_3511 CDS
T03984
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
bsm
Bacillus smithii
Brite
KEGG Orthology (KO) [BR:
bsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsm03021
]
BSM4216_3511
Transcription machinery [BR:
bsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSM4216_3511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
HTH_10
HTH_23
DUF134
HTH_3
DUF1492
GN3L_Grn1
HTH_28
HNF-1_N
KORA
Sigma70_ECF
HTH_37
YflT
Fer4_20
Eno-Rase_FAD_bd
Motif
Other DBs
NCBI-ProteinID:
AKP48671
UniProt:
A0A0H4P3J5
LinkDB
All DBs
Position
1:complement(3067254..3068045)
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AA seq
263 aa
AA seq
DB search
MRKPSQPNECPFKQKVMKWIEEFQRHKCQESQEKIVTHYHHLVESIARKYSKGKSYHEDI
VQVGMIGLLGAIRRYDRSFGKSFEAFAVPTIVGEIKRYLRDKTWSVHVPRRIKELSPKIQ
STVEKLTSEMQRSPQIKEIADYLDISEEEVLEAMEMGRSYQTLSVDRTIEADSEGGTMTL
LDMVGNEEKGYEKVDQRLDLEKVLPVLSEREWKIIQYTYLKNMSQKDVGEKLGISQMHVS
RLQRRAVQKLKKAIRSETMNSEK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaccatctcaacctaatgaatgtccttttaaacaaaaggttatgaaatggatc
gaagagtttcagcgtcataaatgccaagaatcgcaggaaaaaatcgtgacgcattatcat
catttggttgaatcgattgcacgaaagtattccaagggaaaatcttatcatgaggacatc
gtacaagttggaatgatcgggcttttaggggccatccgccgctatgaccgatcttttggc
aaaagctttgaagcgtttgcggtaccaactattgtcggcgagatcaaacgctatttgcgg
gataagacatggagtgttcatgttccccgcagaattaaagaactgagccctaaaattcaa
tcaacagtcgaaaaactgacaagtgaaatgcaaagatcaccgcaaataaaggaaatcgct
gattacttggatatctcggaagaagaagttttggaagcgatggaaatggggagaagctac
cagacgttatccgtagatcgtacaattgaagctgattctgaaggtggcactatgacactg
cttgatatggtgggcaatgaggaaaaaggatatgaaaaagtggatcagcgtctcgacttg
gaaaaggttcttcctgtactgagcgaaagagaatggaaaattatacagtatacgtatttg
aaaaatatgagccaaaaagatgtaggcgaaaagctgggaatttcccaaatgcatgtgtcc
cgtcttcaacgtcgcgccgttcaaaaattaaaaaaagccattcgatccgaaacgatgaat
tcggaaaaatga
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