Bacillus subtilis subsp. natto BEST195: BSNT_08162
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Entry
BSNT_08162 CDS
T02607
Symbol
sigD
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
bso
Bacillus subtilis subsp. natto BEST195
Pathway
bso02020
Two-component system
bso02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSNT_08162 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSNT_08162 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bso03021
]
BSNT_08162 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bso02035
]
BSNT_08162 (sigD)
Transcription machinery [BR:
bso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSNT_08162 (sigD)
Bacterial motility proteins [BR:
bso02035
]
Flagellar system
Flagellar assembly proteins
Stator
BSNT_08162 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
IF2_N
UPF0175
Motif
Other DBs
NCBI-ProteinID:
BAI85277
UniProt:
D4FWP6
LinkDB
All DBs
Position
1727091..1727855
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AA seq
254 aa
AA seq
DB search
MQSLNYEDQVLWTRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVSPAEIAEELGMTVQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAEKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKNLLEKVIQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattatgaagatcaggtgctttggacgcgctggaaagagtggaaagat
cctaaagccggtgacgacttaatgcgccgttacatgccgcttgtcacatatcatgtaggc
agaatttctgtcgggctgccgaaatcagtgcataaagacgatcttatgagccttggtatg
cttggtttatatgatgcccttgaaaaatttgaccccagccgggacttaaaatttgatacc
tacgcctcgtttagaattcgcggcgcaatcatagacgggcttcgtaaagaagattggctg
cccagaacctcgcgcgaaaaaacaaaaaaggttgaagcagcaattgaaaagcttgaacag
cggtatcttcggaatgtatcgcccgcggaaattgcagaggaactcggaatgacggtacag
gatgtcgtgtcaacaatgaatgaaggtttttttgcaaatctgctgtcaattgatgaaaag
ctccatgatcaagatgatggggaaaacattcaagtcatgatcagagatgacaaaaatgtt
ccgcctgaagaaaagattatgaaggatgaactgattgcacagcttgcggaaaaaattcac
gaactctctgaaaaagaacagctggttgtcagtttgttctacaaagaggagttgacactg
acagaaatcggacaagtattaaatctttctacgtcccgcatatctcagatccattcaaag
gcattatttaaattaaagaatctgctggaaaaagtgatacaataa
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