Baekduia soli: FSW04_11165
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Entry
FSW04_11165 CDS
T06127
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bsol
Baekduia soli
Pathway
bsol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSW04_11165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsol03400
]
FSW04_11165
Enzymes [BR:
bsol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FSW04_11165
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FSW04_11165
DNA repair and recombination proteins [BR:
bsol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FSW04_11165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zinc-ribbons_6
Zn_Tnp_IS1595
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QEC48072
UniProt:
A0A5B8U5Z2
LinkDB
All DBs
Position
complement(2358355..2359140)
Genome browser
AA seq
261 aa
AA seq
DB search
MPELPEVERARALIERRALGREIAAVDDTDTYVCRPHAPGELAEALTGRRLVSAHRQGKA
MWIETDGGPSLGLHLGMAGRIVVDDAAAGDPKRDGPGGHRPVWDRFTLTFADGGHLILRD
KRRLGRAVLDPDLGGLGPDAAEIGRDAFRERVGRGEAPLKARIMDQGVLAGVGNLLADEA
LWRARLDPRRPAGSLDADELDHLRRVIRAATRRAIARGGVHTGDVIPHRRRDGVCPRCGA
DMARATIGGRTTYWCSAEQGG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtcgagcgcgcccgcgcgctcatcgagcggcgcgcgctcggt
cgcgagatcgccgccgtcgacgacaccgacacctacgtctgccgcccccacgcccccggc
gagctggccgaggccctcacgggccgccggctcgtctcggcccaccgccagggcaaggcc
atgtggatcgagaccgacggcgggccgtccctgggcctgcacctcgggatggccgggcgg
atcgtcgtcgacgacgcggcggccggcgaccccaagcgcgacgggcccggcgggcaccgg
cccgtctgggaccgcttcacgctcacgttcgccgacggcggtcacctcatcctgcgcgac
aagcgccggctgggccgggccgtcctggaccccgacctcggcggcctgggccccgacgcc
gccgagatcgggcgcgacgcgttccgcgagcgggtcggccgcggcgaggcgccgctgaag
gcgcgcatcatggaccagggcgtgctggcgggcgtcggcaacctgctggccgacgaggcg
ctgtggcgcgcccggctggacccgcgccggcccgccggctcgctggacgccgacgagctc
gaccacctgcggcgcgtgatccgcgcggcgacgcggcgggcgatcgcgcggggcggcgtg
cacaccggcgacgtcatcccccaccgccgccgcgacggcgtgtgcccgcgctgcggcgcg
gacatggcgcgggcgacgatcggcggccgcacgacctactggtgctcggccgagcagggc
ggctga
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