Bacillus subtilis PY79: U712_00560
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Entry
U712_00560 CDS
T02937
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bsp
Bacillus subtilis PY79
Pathway
bsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
U712_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsp03021
]
U712_00560
03400 DNA repair and recombination proteins [BR:
bsp03400
]
U712_00560
Enzymes [BR:
bsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
U712_00560
Transcription machinery [BR:
bsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
U712_00560
DNA repair and recombination proteins [BR:
bsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
U712_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AHA76066
LinkDB
All DBs
Position
125559..129158
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGA
DVKAVIAQQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVMKQFRRGLITEEERYERVISIWSAAKDVIQGKLMKSL
DELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTETIERLE
ERLIGRFARKQVKHPETGEVLVNENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATITEIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVKPVSNVQPTDDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccagataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggtctattctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgtagtttgtgaccgctgcggagtc
gaagtaacacgggctaaagtccgtcgtgagagaatggggcacattgaactggctgcccca
gtttcccacatttggtatttcaaaggtattccaagccgtatgggtcttgtgctggatatg
tcacctcgtgctttagaagaagtcatttactttgcttcttacgttgtaactgatccggcg
aatacaccgcttgaaaagaaacagcttctgtctgagaaagaataccgtgcttatcttgat
aaatacggtaataaattccaagcatctatgggtgctgaagcaattcataaacttcttcaa
gatatcgatcttgtaaaagaagttgatatgttaaaagaagagctgaaaacttcacaagga
caacgccgtactcgtgcgatcaaacgtcttgaagttttagaagccttccgtaactcagga
aacaagccttcttggatgatccttgatgtgcttcctgttattcctccggagcttagaccg
atggttcagctagatggcggacgttttgcgacttctgatttgaatgacctttatcgtcgt
gtcatcaaccgtaacaatcgtttgaaacgccttttggaccttggtgcgcctagcatcatc
gttcaaaacgaaaagcgtatgcttcaagaggctgtcgatgccctaattgacaacggccgc
cgcggacgccctgtaacaggtcctggaaacagaccgttaaaatctctttctcacatgctg
aaagggaagcaaggccgtttccgtcaaaaccttcttggtaaacgtgtcgattactccgga
cgttctgtaatcgttgttggtcctcatttgaaaatgtaccaatgcggattaccgaaggaa
atggcacttgaacttttcaaacctttcgttatgaaagaacttgttgaaaaaggtcttgct
cacaacattaagagtgcgaaacgcaaaattgagcgcgtacagcctgaagtttgggatgta
ctagaatcagttattaaggagcatccggtactgctgaaccgtgcccctacacttcacaga
ttaggtatccaggcgtttgaaccaacgcttgttgaaggacgcgcaatccgtcttcacccg
ctcgtatgtacagcttacaacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgctgaagcacaagctgaagcacgcatcttgatgcttgctgctcaaaacatcttg
aaccctaaagatggtaaaccggttgtaacaccgtctcaggatatggtactaggtaactat
tacctgacacttgagcgtgccggtgctgtcggtgaaggtatggtcttcaagaatacagac
gaagcgcttcttgcttatcaaaacggatatgttcaccttcatacgagagtagctgttgca
gctaactcacttaagaatgtgacatttaccgaagaacagcgctcaaaattgttaattaca
actgtcggtaagcttgtcttcaatgaaattcttccggaatcattcccttacatgaatgaa
ccaacgaagagcaacattgaagagaaaacacctgaccgtttcttcttagaaaaaggtgct
gatgttaaagctgttatcgcacagcagccaatcaatgcgccgtttaaaaaaggcattctg
ggtaaaatcatcgcggaaatctttaaacgattccatattacggaaacgtctaaaatgctt
gaccgcatgaaaaacctaggtttcaaatattcaactaaagctggtattacagttggggtt
tctgacatcgtcgtactcgatgataaacaagaaattcttgaggaagcgcaaagcaaagtt
gacaacgttatgaagcaattccgccgcggtcttatcactgaagaagaacgctatgagaga
gtcatctctatctggagtgctgcaaaagacgttatccaaggcaaactgatgaaatcactt
gatgaactcaacccgatctacatgatgagtgactctggtgcccgtggtaacgcatctaac
tttacgcagcttgccggaatgcgcggcctgatggccaacccggctggacgtatcattgag
ttgccgatcaaatcaagtttccgtgaaggtctgacagtattggagtactttatctccaca
cacggtgcgcgtaaaggtcttgccgataccgctcttaaaactgctgactcaggttacctt
acacgccgtctcgttgacgttgctcaggatgttatcatccgtgaaactgattgcggaact
gaccgaggcattcttgctaagcctcttaaagaaggaactgaaacaattgagcgcttagaa
gaacgcttaatcggacgttttgcaagaaaacaagtgaagcaccctgaaacaggtgaagtg
cttgtgaatgaaaacgaactgatcgatgaagataaagcactggagattgtcgaagccggc
attgaagaagtgtggatccgttctgccttcacatgtaatacgcctcatggtgtatgtaaa
cgatgctatggccgaaatcttgcaactggctccgatgttgaagtcggtgaagctgtcgga
atcattgctgcccaatcaatcggtgagcctggtacacagttaacaatgcgtacattccat
acaggcggggttgccggagacgatatcacacagggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaggcaacaattacagaaatcgacggtacagtcgttgag
atcaatgaagttcgtgataagcaacaggaaattgtggttcaaggcgcagtggaaacacgt
tcttatacggcaccttacaactcccgcctgaaagtagcggaaggagataaaattactcga
ggccaagtactgacagaaggttcaatcgatccgaaagaacttcttaaagtgactgacctg
acgactgttcaagagtatcttctccatgaggttcaaaaggtttaccgtatgcagggtgtt
gaaatcggtgataaacacgtagaagtaatggttcgccagatgcttcgcaaagtacgcgtg
attgatgccggtgacactgatgtgcttccaggtacattgcttgatattcaccaatttact
gaagcgaacaaaaaggtattgcttgaaggcaaccgaccagctacaggccgtcctgtctta
ctcggtattacaaaagcatctcttgaaactgattcattcttatctgctgcttccttccag
gaaacaacacgtgtccttacagatgcagcgatcaaaggtaagcgtgacgagcttctcggc
ttgaaagagaatgttatcatcggtaagcttgttccagcaggtacaggaatgatgaaatac
cgtaaagtaaaaccagtatcaaatgttcagccgactgacgatatggtcccggttgaataa
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