Bacillus subtilis QB928: B657_13410
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Entry
B657_13410 CDS
T02292
Symbol
ykoV
Name
(GenBank) ATP-dependent DNA ligase subunit
KO
K10979
DNA end-binding protein Ku
Organism
bsq
Bacillus subtilis QB928
Pathway
bsq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
B657_13410 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsq03400
]
B657_13410 (ykoV)
DNA repair and recombination proteins [BR:
bsq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
B657_13410 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
DUF1631
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
AFQ57269
LinkDB
All DBs
Position
complement(1385856..1386791)
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AA seq
311 aa
AA seq
DB search
MNRTPSLHTKEKKGFIDMHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIK
YEKVCTNCEKTLSPDEIVKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQEID
PIYFNRSYFVGPGDNGTKAYTLLREALRSTGKIGIANMTIRSKQQLAILRVYENCIVMES
IHYPDEVRSAAQVPGVPDQSNVNDKELQTAITLIDELTAKFEPEKYEDTYRQALLQRVND
KLENKETAVTPDKAPPREDVIDLVSALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKQ
KTTRKKASGTS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtactccttctcttcacactaaagaaaaaaaggggtttatcgatatgcataca
atgtggaagggatcgatcagcttcggattagtaaacatccccatcaagctatatgcggcc
acagaagataaagatattaaactgcgcagcctccataaagaggatcacgcaccaatcaaa
tacgagaaagtttgcacaaattgcgaaaaaactcttagtcctgatgaaattgtgaaggga
tatgaatatgtaaaaggaaaatatgtagtgctgacagacgaagatttaaaaagcttaaaa
caggagcatgaggagaaagcagttgagattgttgactttgttcagcttcaggaaattgat
ccgatttattttaaccgctcctactttgtcggccccggggataatgggacgaaggcctat
accctgctgcgtgaggcgctgcgctcaaccggaaagatcggtatcgccaatatgacaatc
aggtcaaagcagcagctggcgattctccgcgtttatgaaaattgtatcgtcatggagtct
atccattatcccgatgaggtcagaagcgccgctcaagtcccaggtgtacctgatcaatcg
aatgtaaacgataaggaactgcaaactgctatcacattaatagatgaactgactgctaag
tttgagcctgagaaatatgaagacacgtaccgacaggcgctgctgcaaagagtcaacgac
aagctagaaaataaagaaacggctgtcactcctgataaagcgccacctcgtgaagatgtc
attgacctggtaagcgctctgcaagccagcatcgacagaaccagaaggccgaaccgggag
acaccggctgccgcacctgcacaagccgctgaaccgaaaggagccggagataaaaaacaa
aaaacaactagaaaaaaagcctccggcacatcatag
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