Bacillus subtilis subsp. spizizenii W23: BSUW23_08745
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Entry
BSUW23_08745 CDS
T01302
Symbol
ymcB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bss03016
]
BSUW23_08745 (ymcB)
Enzymes [BR:
bss01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BSUW23_08745 (ymcB)
Transfer RNA biogenesis [BR:
bss03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BSUW23_08745 (ymcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
DUF3079
Motif
Other DBs
NCBI-ProteinID:
ADM37795
UniProt:
E0TV24
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All DBs
Position
1729426..1730955
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AA seq
509 aa
AA seq
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MNEKQKLESGQVNPSDKKSEKDYSKYFEAVYIPPSLKDAKKRGKEAVTYHNDFKISEQFK
GLGDGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENK
VFGELGHLKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLS
EAYLSKEMVIEVWSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSR
RPEEIIQEVRRLASEGYKEITLLGQNVNAYGKDFEDMTYGLGDLMDELRKIDIPRIRFTT
SHPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYMELVRKIKAAMP
NASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVK
KERLQRLNALVNEISAKKMKEYEGKVVEVLVEGESKNNPDILAGYTEKSKLVNFKGPKEA
IGKIVRVKIQQAKTWSLDGEMVGEAIEVK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagcaaaaattagagagcggacaagttaatccatcggacaaaaaatccgag
aaggattacagcaagtactttgaagctgtgtatattccgccttccttaaaagatgcgaaa
aaacgaggcaaggaagccgttacttatcataatgactttaaaatttctgaacaatttaaa
ggattgggagacggaagaaagttctatatccgtacgtacggctgtcaaatgaatgaacac
gatacagaggttatggcagggatctttatggcgctcggttacgaagcgacaaattctgtt
gatgatgccaatgtcattttgttaaacacatgtgcgatccgtgaaaatgccgagaacaag
gtgtttggtgagctagggcatttaaaagcgctgaaaaaaaataatcccgacctgatttta
ggcgtgtgcggctgtatgtcccaagaggaatcagtcgtgaaccggattttgaaaaagcat
ccgtttgtcgatatgattttcggaacgcataacatccatcgcctgccagagcttttgtca
gaagcatatctttcaaaagaaatggtcatagaagtttggtccaaggaaggggacgttatt
gaaaaccttccgaaagtccggaacggaaaaattaagggctgggtcaatatcatgtacggc
tgtgacaaattctgtacgtattgcattgtgccttacacacgcggaaaagaaagaagccgc
cgccctgaagagatcattcaggaagtgagaaggctcgcaagtgaaggctataaggaaatt
acactattaggccaaaacgtaaacgcgtacggaaaagattttgaagatatgacgtacgga
cttggtgatttgatggatgaactgagaaaaatcgatatcccgagaatccgttttacaacg
agtcatccgcgtgactttgacgaccgtctcattgaagtgctggcaaaaggcggcaatctg
cttgatcacattcatcttccggttcaatcaggaagctcagaggttctgaagctgatggcc
cgcaaatatgacagagagcgttacatggagctcgtgcgaaaaattaaggcagcaatgccg
aacgcatcattgacaacggacattatcgtcggattcccgaacgagacggacgaacagttt
gaagaaacgctttctctataccgtgaagtagagtttgacagcgcttatacgttcatttat
tctccgcgtgagggcactccagctgccaaaatgaaagataatgtaccgatgcgcgtgaaa
aaagaacgtctgcagcgtctgaacgcactggtgaatgaaatttctgctaaaaaaatgaag
gaatacgaaggcaaggttgtcgaagtattagttgaaggtgaaagcaaaaataaccctgat
attcttgccggctatactgaaaaaagcaagcttgtcaatttcaaagggccgaaggaagcc
atcggcaaaatcgtccgcgtgaaaatccagcaagcgaaaacatggtcgcttgacggagaa
atggtaggagaagcaatcgaggtgaaataa
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