Bacillus subtilis subsp. spizizenii TU-B-10: GYO_2460
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Entry
GYO_2460 CDS
T01635
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bst
Bacillus subtilis subsp. spizizenii TU-B-10
Pathway
bst03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYO_2460 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bst03400
]
GYO_2460 (nth)
Enzymes [BR:
bst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GYO_2460 (nth)
DNA repair and recombination proteins [BR:
bst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYO_2460 (nth)
Prokaryotic type
GYO_2460 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
MutS_II
HHH_5
EDR1
CrtO
Motif
Other DBs
NCBI-ProteinID:
AEP87081
UniProt:
G4NSV0
LinkDB
All DBs
Position
complement(2311297..2311956)
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AA seq
219 aa
AA seq
DB search
MLNLKQIEFCLDKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK
RPEDYLAVSLEELQQDIKSIGLYRNKAKNIQKLSKMIIEDYGGEVPRDRDELVKLPGVGR
KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKVPKEDWSVTHHR
LIFFGRYHCKAQSPRCAECPLLSLCREGQKRDKKGLVKR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatctaaaacaaattgaattctgtttagacaagataggcgacatgtttccccac
gcagagtgtgaactggttcattccaatccttttgaattagtggtggcagtcgctttatct
gctcaatgcacagatgcacttgtaaacagagtgaccaaaacattatttcaaaaatataaa
cggccggaagactatttggctgtttcgctggaagagcttcagcaggatattaaatcaatc
ggtttgtatcgcaataaagcgaaaaacatccaaaaactaagcaaaatgattattgaagat
tacggcggggaagtgccgcgagaccgtgatgagcttgtcaaactgccaggtgtcggaaga
aagaccgccaacgtcgtggtatccgttgcctttggcgtgccggccatcgccgtagatacc
catgtggagagagtcagcaagcgtttgggaatctgccgttggaaggactcggtgctggaa
gtggaaaagacgttgatgcgcaaggttccgaaagaagactggtccgttacgcatcaccgg
cttattttcttcggcagatatcactgtaaggcccagtcaccgcgctgtgcggaatgcccg
ctgctttctctgtgcagagaagggcagaagagagataaaaaaggactggtgaaacgatga
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