Bacillus subtilis subsp. spizizenii TU-B-10: GYO_3854
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Entry
GYO_3854 CDS
T01635
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
bst
Bacillus subtilis subsp. spizizenii TU-B-10
Pathway
bst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYO_3854 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bst03400
]
GYO_3854 (uvrA)
DNA repair and recombination proteins [BR:
bst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYO_3854 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GYO_3854 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_22
AAA_21
nSTAND3
AAA_25
AAA_23
AAA_33
ATPase_2
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
BCA_ABC_TP_C
cobW
MMR_HSR1
PRK
NB-ARC
MeaB
DUF87
NTPase_1
Septin
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AEP88426
UniProt:
G4P197
LinkDB
All DBs
Position
complement(3567684..3570557)
Genome browser
AA seq
957 aa
AA seq
DB search
MAMDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKP
HCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIVSGRKGAHVKVLDQIRKQGYVRVR
IDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
EEELMFSEHHACPHCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDADLVIPNQDLS
LKENAVAPWTPISSQYYPQLLEAVCTHYGIDMDVPVKDLPQHQLDKVLYGSGDDLIYFRY
ENDFGQIREGEIQFEGVLRNIERRYKETGSDFIREQMEQYMSQKSCPTCKGYRLKKEALA
VLIDGRHIGKITEQSVADALAFFKGLTLSEKDMQIANLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNT
LIVVEHDEDTMMAADYLIDIGPGAGIHGGQVMAAGTPEEVMEDPNSLTGSYLSGKKFIPL
PPERRKPDGRYIEIKGAAENNLKKVNAKFPLGTFTAVTGVSGSGKSTLVNEILHKALAQK
LHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKG
KSISDVLDMTVEDALSFFENIPKIKRKLQTLFDVGLGYITLGQPATTLSGGEAQRVKLAS
ELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIV
DLGPEGGAGGGTIVASGTPEEITEVEESYTGRYLKPVMERDKKRMTSLLEAKETATS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggctatggatcggatagaggtgaagggagcccgggcgcataacctgaaaaatatcgat
gtaacgattccaagagatcagcttgtcgttgttactggtttgtccggatcagggaaatcc
tcccttgcctttgataccatatatgcagaagggcagagacggtatgtcgagtcattgtct
gcctatgcccgccagtttttaggacagatggataagccggatgtcgatgcgattgagggg
ctgtctcccgccatcagcatcgaccagaaaaccacgagccgcaatccgaggtctactgtc
ggtacggtaactgaaatttatgattatctgcgtcttttgtatgcgagagtagggaagcct
cattgtccggagcacggaattgagattacatcgcagaccatcgagcaaatggtcgacaga
attctggaatacccggaacggacgaagcttcaggtgctggccccgatcgtatcgggccgt
aaaggcgcccatgtcaaagtccttgaccagatcagaaaacaaggttatgtcagagtcaga
attgacggcgaaatggctgagctttctgatgatattgaattagaaaagaataaaaagcat
tcgattgaggttgtcattgaccggattgtggtgaaagaaggtgtggcggcccgtctgtca
gattcattggaaacggcgcttcgtttaggtgaagggcgggtcatgattgatgtcatcggt
gaggaagagctgatgtttagtgagcatcatgcctgcccgcactgtggtttttcaatcggt
gagcttgagccgcggctgttttcgttcaatagcccgttcggagcgtgtccgacatgtgac
ggtctcggaatgaagcttgaagtggatgcggatctcgtcatccccaatcaagatttgtca
ttaaaggagaatgcggtcgccccttggacaccgatcagttcacagtattatccgcagctt
cttgaggcggtctgcacccattatgggattgatatggacgtgccagtaaaagatctgccg
cagcatcagctggataaagtgctgtacggcagcggagacgacctgatttatttccgttac
gaaaatgattttgggcaaatccgtgaaggcgaaattcaatttgaaggcgtattgcgcaat
attgaaagacggtataaggagacaggctctgatttcatccgtgagcaaatggagcagtat
atgtctcagaagtcttgtccgacatgcaaaggctatcggttaaagaaagaggcgcttgcc
gtactgattgacggccgccacatcggaaaaattaccgagcagtctgtagccgacgcactt
gctttcttcaaaggtcttaccctttctgagaaggatatgcagattgccaatttgatcttg
cgtgaaattgtggagcgtttaagctttctggacaaagtcggccttgattacctgacattg
agcagggcagcgggaacattgtccgggggagaggcgcagcgcatcaggctggcaacgcaa
atcggctcgcgcttatccggtgtgctttatattttagatgaaccgtctatcggcctgcat
cagcgtgataacgaccgcttgatcagcgctctgaaaaatatgagagaccttgggaacacg
ctgattgttgtcgaacacgatgaggacacgatgatggcagccgattatttaatagatatt
ggacctggtgccggcattcacggcggtcaggtgatggctgcgggtacgccggaagaagtg
atggaagatccaaattcattaacgggcagctatttatcagggaaaaagttcatcccattg
cctcctgaaagaagaaagccggacggccgttacattgaaattaaaggcgctgcagaaaac
aacctgaaaaaagtgaatgccaagttcccgcttggaacgttcacagcggttacaggggtt
tccggctcaggaaagagtactctcgtcaatgaaattttgcataaggcgctggcgcaaaag
cttcataaagcgaaggcgaagcccggcagccataaagagattaaaggtttggatcattta
gacaaagtcattgatattgatcaggcgccaattggaagaacgccgagatccaaccctgcg
acatacaccggtgtgtttgatgacattcgagatgtattcgcgcagacaaatgaagcgaag
gtccgcggttataaaaaaggccgcttcagctttaacgtgaagggcgggcgctgtgaagcc
tgccgcggagacgggattattaaaattgaaatgcacttccttcctgacgtgtatgttccg
tgcgaggtgtgccacggcaaacgctataaccgtgaaacgcttgaagtgacgtacaaagga
aaaagcatctctgatgtgcttgatatgacggttgaagatgctctttctttctttgaaaat
atcccgaaaatcaagcgtaagctccaaactctttttgatgttggcttaggttatattacg
ctcggtcagccagcgacaaccttgtcgggcggagaagcgcagcgtgtgaagcttgcatca
gagctgcacaaacgctcaactgggcgtacgctctacattttagacgagccgacgacaggt
ttgcacgtcgacgacatcgccagactccttgtcgtgcttcagcgtttggttgacaatgga
gatacagtactcgtcattgagcacaatcttgatatcattaagacggcggattacattgtc
gatctggggccagaaggcggagccggaggcggaaccattgtcgcgtcaggaacgcctgag
gaaatcactgaagtggaagaatcgtatacaggccgttatttgaagcctgttatggagcgt
gacaaaaaacgcatgacatcgctcttggaagcgaaagaaacggcaacatcttaa
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