Burkholderia stabilis: BBJ41_32300
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Entry
BBJ41_32300 CDS
T04946
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bstl
Burkholderia stabilis
Pathway
bstl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBJ41_32300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bstl03021
]
BBJ41_32300
Transcription machinery [BR:
bstl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBJ41_32300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
GerE
Motif
Other DBs
NCBI-ProteinID:
AOR72090
UniProt:
A0A1D7ZQF0
LinkDB
All DBs
Position
2:3226696..3228747
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AA seq
683 aa
AA seq
DB search
MTKKLNEVSVEDDANQSDEQPAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTAEELEE
RRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAET
LLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIA
KRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNASDSADTDGFS
AKEAEAIENEDEEAEEEEEEEEEEEDDGAAQASANAAQLEALKRASLDKFSQISEWFDKM
RRAFEKEGYKSKAYLKAQETIQAELMTIRFTARTVERLCDTLRAQVDEVRQVERQILHTV
VDKCGMPRSEFIARFPGSETDLDWAEKITAEGHSYSAVLSRNVPAIREQQQRLLDLQARV
VLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIG
LMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQIL
QETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAP
ADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIE
AKALRKLRHPSRSDKLKSFLEGN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaagctgaacgaagtatccgtcgaagacgacgcaaatcagagcgacgagcag
cccgcagccgcggctgcaccgggcaaatccaaggtgcgcgatcgtcgcgccaaggaaaag
gcgctgctgaaggaagcgttcgcgacgagcacgccgggcacggccgaggagctcgaagag
cgccgcgtgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttccttacgtac
gccgaaatcaacgaccacctgccggacaacttcaccgagaccgaagccctcgaaggcatc
atcggcacgttcaacgacatgggcgtggcggtttacgagcaggcgccggacgcggaaacg
ctgctcctgaacgacaacgcgccggccgcgtcgtcggacgatgaagtcgaagaggaagcg
gaagtcgcgctgtccaccgtcgattcggaattcggccgcacgaccgatccggttcggatg
tacatgcgtgaaatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgagatcgcg
aagcggatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccgacgacg
attgccgacatcctcgcgatggcggagcgcgtcgcgaacgaagagatccgcgtcgacgaa
ctcgtcgacggcctgctcgatccgaacgcatcggattccgccgataccgacggcttctcc
gcgaaggaagcggaagccatcgagaacgaggacgaggaagccgaagaggaagaggaagaa
gaggaagaagaggaggacgacggtgccgcgcaagcatcggccaacgccgcccagctcgaa
gccctcaagcgtgcatcgctcgacaagttctcgcagatcagcgagtggttcgacaagatg
cgccgcgcgttcgaaaaggaaggctacaagtcgaaggcctacctgaaggcgcaggaaacg
atccaagccgaactgatgacgatccgcttcaccgcgcgtaccgtcgagcgcctgtgcgac
acgctgcgtgcgcaggtggacgaagtgcgtcaggtcgagcgccagatcctgcacaccgtc
gtcgacaagtgcggcatgccgcgttcggaattcatcgcgcgcttcccgggcagcgagacg
gatctcgactgggccgagaagatcacggccgaaggccattcgtacagcgcggtgctgtcg
cgtaacgttccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcgcgcgtc
gtgctgccgctgaaggacctgaaggaaaccaaccgccagatggcggccggcgaactgaag
gcacgccaggcgaagcgcgagatgaccgaggccaacctgcgtctcgtgatctcgatcgcg
aagaagtacacgaaccgtggtctgcagttcctcgacctgatccaggaaggcaacatcggc
ctgatgaaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacctatgcg
acgtggtggatccgtcaggccatcacgcgctcgatcgctgaccaggcgcgcacgatccgt
attccggttcacatgatcgaaacgatcaacaagatgaaccgcatctcgcggcagatcctg
caggaaaccggtctcgagccggatccggcaacgctcgccgagaagatggaaatgccggaa
gacaagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatc
ggtgacgacgacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccg
gcagatgccgcgctgcatgccagcatgcgcgacgtcgtgaaggacgtgctcgattcgctg
acgccgcgtgaggcgaaggtgctgcggatgcgcttcggtatcgagatgagcaccgatcac
acgctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcggatccgtcagatcgag
gccaaggcgctgcgcaagctgcgtcacccgagccgttccgacaagctgaagtcgttcctc
gaagggaactga
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