Basfia succiniciproducens: A4G13_00725
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Entry
A4G13_00725 CDS
T06488
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsun
Basfia succiniciproducens
Pathway
bsun03030
DNA replication
bsun03430
Mismatch repair
bsun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4G13_00725
03430 Mismatch repair
A4G13_00725
03440 Homologous recombination
A4G13_00725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsun03032
]
A4G13_00725
03400 DNA repair and recombination proteins [BR:
bsun03400
]
A4G13_00725
Enzymes [BR:
bsun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4G13_00725
DNA replication proteins [BR:
bsun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4G13_00725
DNA repair and recombination proteins [BR:
bsun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4G13_00725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIM68023
LinkDB
All DBs
Position
140211..143690
Genome browser
AA seq
1159 aa
AA seq
DB search
MPEPRFVHLRVHSDFSMIDGIAKVKPLVKTCVQENMVAMALTDFTNFCGLVKFYGEALGS
GIKPIMGADVSVKSDLCGDERFELTLLAKNNAGYKNITLLLSKAYQRGYEDVPYIDQDWL
AEYNEGIIVLSGGRKGDVGKKLLKTGAADEVENAVGFYQKYFPDHYYLSLSRTGHNEEET
YIKAALKLAEKHNLPVVATNDVVFLKSEDFEAHEIRVAIHDGFTLDDPKRPKLYSDRQYF
RSEQEMCELFADIPSALENTLLIAQRCNVTIRLGEYFLPQFPTGELSTEDYLIKRAKDGL
EERLKVLFPDEKEREEKRPAYDERLDTELGVINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDNRDKVIEHVAD
MYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFDAEPQ
LQQIYDSDEEVKALIDMARKLEGVTRNAGKHAGGVVISPTLITDFSPLYCDSEGKHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDMINARMDREGKPHIDINHIPLDDPESFNLL
LKSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLESGMVRNFIDRKHGREE
VAYPDAQYQHECLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEM
AKQRSVFEKGAIEKGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTSEMDNTDKIVGLYDECLRMGLTVTPPDINTGKHHFSVNDHGEIVYGIGAIKG
VGEGPIEALVSAREKGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALKASDQHAKDEAAGQADMFGVLTESPEEVEIAYANTPRWSEKQILDGERETLGLY
LSSHPISRYLKELSHYSPNRLKDLVPNIRGQVSTASGLVVASRFAVTKKGNRLGIATLDD
RSGRLDITLFAEALEKFGEKLQKDSVVVVSGQVSFDDFTQGLRMSVRDLMTLDEARSRYA
KSLAISLSQQQITPQFLKRFKSVIEPYSGGTMPINVYYQSPQGRALLKLGIQWYIKPTDE
LLSELVNMLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacctcgttttgtccatttgcgtgtacatagtgatttttccatgattgacgga
atagccaaagtaaaacctttggtgaaaacctgtgtgcaggaaaatatggtggcaatggca
cttacggattttactaacttctgcggtttagtaaagttttacggtgaggcgttaggttcc
ggtatcaagccgattatgggtgccgatgtgtcggtgaaaagcgatctttgcggtgacgag
cgttttgaattgactttattggcgaaaaataatgcaggctataaaaatattaccttattg
ctttctaaagcctatcaacgcggttatgaggatgtgccttatatcgatcaggattggttg
gcggaatataacgaaggaattattgttctttccggcggtcgcaaaggggatgtaggcaaa
aaattattaaaaaccggtgccgccgatgaagtggaaaatgcggtcggcttttatcaaaaa
tatttccccgatcattattatctaagcctcagccgcaccggtcataacgaagaagaaaca
tatattaaagcggcgcttaagttggccgaaaaacataatttacccgttgtcgccactaat
gacgtagtatttttaaaatcggaggattttgaagcccatgaaatcagggtagcgattcac
gacggttttactctagatgatccgaaacgcccgaaactttatagcgaccggcaatatttc
cgttccgaacaggaaatgtgtgagctttttgccgatattccttccgctctggaaaatact
ttattgattgcacagcgttgcaatgtgaccatccgtttgggcgaatatttcttgcctcag
ttcccaaccggcgagttgagtaccgaagattatttgatcaagcgcgctaaagacggcttg
gaagagcgtttaaaggtactattccccgatgaaaaagaacgtgaggaaaagcgtcccgct
tatgacgagcgtttagataccgaactgggcgtgattaaccagatgggattccccggctac
tttttaatcgtaatggaatttattcagtggtcgaaggataataatattccggtagggccg
gggcgcggttccggtgcgggatcattagtcgcttacgcactgaaaattacggatttggat
cctcttgaattcgatttgctgtttgaacgttttctaaatccggaacgggtttctatgccc
gacttcgacgtggacttctgtatggataaccgcgataaagtgatagaacatgtggcggat
atgtacggacgcggcgccgtatcgcaaattatcacctttggtaccatggcggcaaaagcg
gtaattcgagatgtagggcgggtcttagggcatccttacggctttgtggatcgtatttca
aaactgattccgccggatccgggtatgactttagctaaagcttttgatgccgaacctcaa
ctgcagcagatttacgatagcgatgaagaagtcaaagcgctgattgatatggcgcgcaaa
ctggagggggtcacgcgtaatgccggtaaacatgccggcggagtggtgatttcaccgact
ttaattaccgatttctctcctctttattgcgatagtgaaggtaaacatcctgttacccat
tttgataaaaatgacgtggaatatgcagggttggtcaaattcgactttttaggtttacgt
acgcttaccatcattaaatgggcgctggatatgattaacgcccgtatggatcgggaaggt
aagcctcatattgatattaaccatattccgttggatgatcccgagtctttcaatttattg
ctgaaatcggaaactacggcggtgttccagttggaatcccgcggtatgaaagacctgatt
aaacgtcttcagccggactgttttgaggatattatcgcgttggtggctttattccgtccg
ggaccgcttgaatccggcatggtgcgaaattttatcgaccgtaaacatggacgtgaagaa
gtggcgtaccctgatgcacaatatcagcacgaatgtttgaaaccgattttagagccgacc
tacggcgttatcgtttatcaagaacaggttatgcaaatcgctcaggaactggccggctat
acgctgggcggggcggacttattacgccgtgccatgggtaagaagaaaccggaagaaatg
gcaaaacaacgttccgtattcgaaaagggcgctatcgaaaaaggcattgacggcgaactt
gccatgaagattttcgacttggtggaaaaatttgccggttacggttttaataaatctcac
tcggcggcttacgctttggtttcatatcaaaccctatggctgaaaacccattatccggcg
gaatttatggcggcggtaatgacttccgaaatggataacaccgataagattgtcgggtta
tatgacgaatgtttgcgcatgggattaaccgttacgccgccggatatcaataccggcaaa
catcatttcagcgtaaatgatcacggtgaaatcgtctatggtatcggtgcgattaaaggc
gtgggcgaaggtccgattgaagctcttgtttcagctcgtgaaaaaggcgggatttttaaa
gatttgtttgatctctgtgcccgcgtcgacttgaaaaaaattaaccgccgtacctttgaa
agtctgattatgtccggcgcttttgataaattaggaccgcaccgcgccgccctttccaaa
aatctggaagatgcgctgaaagcttcggatcagcatgcaaaagatgaagcggcggggcaa
gccgatatgttcggcgtattgacagaaagcccggaagaggtggaaatcgcttatgcgaat
acgcctcgctggtcggaaaaacaaattcttgacggcgagcgggaaacgctgggcttatat
ttgagcagccatcctatcagccgttatttgaaagaattatcccattacagcccgaatcgg
ttgaaagatttagtcccgaatattcgcgggcaggtcagtaccgccagtggcttggtggtg
gcttcccgttttgcggtaacgaaaaaaggtaaccgacttggtatcgccactcttgacgac
cgctccgggcgcttagatattacgctatttgccgaagcgttagaaaaattcggagagaaa
ttacaaaaagacagtgttgttgtggtgtccggtcaggtgagttttgatgatttcactcaa
ggtttacgtatgtcggtacgagatttaatgaccttagacgaagcccgcagtcgttatgcc
aagagtttagccattagtctgagtcagcaacaaattacgccgcagtttctcaaacggttt
aaaagcgtgattgaaccttatagcggcggtactatgccgattaatgtgtattatcaaagt
ccgcaaggcagagcgttgttaaaactgggcattcaatggtatatcaaaccgacggacgag
ctattaagcgagctggtgaatatgttgggtgaaagtgcggtagaactggaatttgaataa
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