Bradyrhizobium symbiodeficiens: CIT39_09955
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Entry
CIT39_09955 CDS
T06284
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIT39_09955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_09955
Transporters [BR:
bsym02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CIT39_09955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
YmgD
Motif
Other DBs
NCBI-ProteinID:
AWM06742
UniProt:
A0A2U8Q9U1
LinkDB
All DBs
Position
2188261..2189862
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AA seq
533 aa
AA seq
DB search
MDRRTVLKGLAGAGGLALTGVSAPAIAQGASARTLRFVPQANLANFDPIWGTQYVVRNAA
ALVWDTLYGIDSSLQPQRQMVESEQVSDDGTTWTFKLRPGLKFHDGEPVLSKDVVASLTR
WAVRDPMGLMIKALQQELTAVDDRTFKWVLKQPFPKMLYALGKNNSPCAFIMPERIAQTD
PFKQIGDYVGSGPMKFAKAEWVPGAKAVFEKFADYAPRQEKSSWLAGGKQMLVDRIEWIV
MPDAATAAAALQNGEIDWWENPIADLVPVLKKNKNISVDIGDPLGNIGSFRMNFLYPPFN
DVRARRAVLMAMSQEDYMRAIVGDDNSLWKPLPGFFTPDTPLYSEAGGEILKGKRDLDAA
KKLLAESGYSGQPVTCLVAQDQPITKAQGDVTADLLKKLGMNVDFVATDWGTVGSRRALK
TPPGQGGWNMFHTWHAGADCTNPAPYTAIRANGDKAWFGWPTSAGTEKEVTSWFEAKNLD
EEKAAIGRLNKAAMDDVVYAPTGFFLSYTAWRKNVSGIAKGPLPFFWGVSKSA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaggaccgtattgaagggactggccggcgcgggcggtctggcattgaccggc
gtctcggccccggcgatcgcgcaaggtgcttctgcccgcaccctgcgcttcgtgccgcag
gccaatctcgccaatttcgatccgatctggggcacgcaatatgtcgtgcgcaatgctgcg
gcgctggtctgggacacgctttacggcatcgattcctcgctgcagccgcagcgccagatg
gtcgagtccgagcaggttagcgacgacggcacgacctggaccttcaaattgcggcccggc
ctcaaattccacgatggcgagccggtgctgagcaaggatgtcgtcgcgagcctgacgcgc
tgggcggtgcgcgatccgatgggcctgatgatcaaggcgctccagcaggaactcaccgcc
gtcgacgaccgcaccttcaaatgggtgttgaagcagcccttcccgaaaatgctctatgcg
ctcggcaagaacaactcgccgtgcgccttcatcatgcccgagcgcattgcgcagacggat
cctttcaagcagatcggcgattatgtcggctccggcccgatgaagttcgccaaggccgag
tgggttccgggcgcgaaagccgtattcgagaaattcgccgactacgcgccgcggcaggag
aagtcgtcatggctcgccggcggcaagcagatgctggtcgatcgcatcgaatggatcgtg
atgccggatgcggccaccgcggccgcagcgctgcaaaatggcgagatcgactggtgggag
aacccgatcgccgacctcgttccggttctgaagaagaacaagaacatcagcgtagatatc
ggcgatcccctcggcaatatcggctcgttccgtatgaatttcctgtacccgcccttcaac
gacgtgcgggcgcggcgtgcggtgctgatggcgatgagccaggaagactacatgcgcgcg
atcgtcggcgacgataactcgctctggaagccgctgcccggcttcttcacgccggacacg
ccgctctattccgaggcgggcggcgagatcctgaagggcaagcgcgatctcgacgcggcc
aagaagctgctcgccgagagcggttattcaggccagccggtgacgtgcctcgtcgcgcag
gatcagcctatcaccaaggcgcagggcgacgtgaccgcggacctgctgaagaagctcggc
atgaacgtcgacttcgtcgcgaccgactggggcacggtcggctcccgccgcgcactgaag
acccctccggggcagggcggctggaacatgttccacacctggcacgcgggcgcggactgc
accaaccccgcgccctacaccgccatccgcgccaatggcgacaaggcctggttcggctgg
ccgaccagcgcaggtaccgagaaggaagtcacgtcatggttcgaggccaagaacctcgac
gaggaaaaggccgccatcggtcgcctcaacaaggcggcgatggacgacgtcgtctatgcg
ccgaccggcttcttcctgagctacacggcttggcgcaagaacgtctccggcatcgccaag
gggccgttgccgttcttctggggcgtttcgaaatccgcatga
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