KEGG   Bradyrhizobium symbiodeficiens: CIT39_28810
Entry
CIT39_28810       CDS       T06284                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bsym  Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:bsym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsym03400]
    CIT39_28810
Enzymes [BR:bsym01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CIT39_28810
    5.6.2.6  RNA 3'-5' helicase
     CIT39_28810
DNA repair and recombination proteins [BR:bsym03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CIT39_28810
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AWM10046
UniProt: A0A2U8QIK2
LinkDB
Position
complement(6047706..6050303)
AA seq 865 aa
MPPRILKTSAETPALLPDRFNAWFAARGWSPRAHQLALLEKAREDRSALLIAPTGAGKTL
AGFLPTLVELSQQPIEREAGEKKSLVSTGRSVQRSGGLHTLYISPLKALAVDIARNLERP
IAEMALPIKVETRTGDTPVSRRQRQRRYPPDVLLTTPEQLALLLSSDDAPFLFSSLKRIV
LDELHALVTSKRGDLLSLGLARLWRLAPQMRAIGLSATVAEPDQLARFLVPQPDGKEAAA
DIVIAGGAAPPEVEMLDTRERLPWAGHSARHALPEIYELIKANKTTLVFVNTRSQAEMLF
QNLWSMNDDGLAIALHHGSLDVAQRRKVEDAMSAGRLRGVVCTSSLDLGVDWGDVDLVVN
IGAPKGSSRLMQRIGRANHRLDEASRAVLVPANRFEVLECRVAIDAIAENAQDTPPLRKG
GLDVLAQHVLGCACGEPFLSDELYAEVRTAAPYADLSRPDFDDVVDFVASGGYALKTYER
FARIKQDKEGRWRVANPKVRQSYRMNVGTIVEDDMLKVRLVRSRGGGQGKAGGSTGVIAR
GGRLLGEIEEAFIEGLSPGDTFVFSGEVVRYETLVEDQVYVSRAHDKDPKVPSYMGGKFP
LSTYLAERVRRLLDDARAWRGLPEQVRDWLSLQKDVSSVPAVRELLVESFPRANKHYIVC
YPFEGRLAHQTLGMLLTRRLERARARPLGFVANEYAVAIWALGDLSFMIRDGRIDLNALF
DPDMLGDDLEAWLAESALMKRTFRNCAIISGLITRRHTGEEKSRRQVLFSTDLVYDVLRK
HQADHVLLRAARADAATGLLDLRRLSDMLVRIHGRITHRELDRVSPLAVPVMLEIGRESV
YGEAADELLAEAADELVKEAMDRSG
NT seq 2598 nt   +upstreamnt  +downstreamnt
gtgccgccccgtattctcaaaacatcggccgaaacgcctgcgctgctgcccgaccgcttc
aacgcgtggttcgcagcccgcggctggtcgccgcgcgcgcatcaattggcgctgctggag
aaggcccgtgaggaccgctcggcgctgctgatcgcaccgaccggcgccggcaagacgctg
gcgggatttctgccgaccctggtggagctttcgcaacagccgatcgaacgggaggccggt
gagaagaaaagcctcgtctccaccggtcgcagcgtgcaacgttccggcggcctgcacacg
ctctacatctcgccgctgaaggcgcttgccgtcgacatcgcgcgcaatctggagcggccg
attgcggagatggcgctgccgatcaaggtcgagacccgcaccggcgacacgccggtgtcg
cggcgccagcggcagcggcgctatccgcctgacgtattgctgacgacgcccgagcagctt
gcgctgctgctgtcctcggatgacgcgccattcctgttctcctcgttgaagcgcatcgtg
ctcgacgagctgcatgcgttggtgacgtccaagcgcggcgatctgctctcgctcgggctg
gcgcggctgtggcggctggcgccgcagatgcgcgcgatcggcctgtcggcgacggtggcc
gagccggatcagctcgcgcgcttcctggtgccgcagcccgacggcaaggaggctgctgcc
gacatcgtcatcgccggcggcgcggcgccgcccgaggtcgagatgctcgacacgcgcgag
cgcctgccctgggccggccacagcgcgcgccacgcgctccccgagatttacgagctgatc
aaggcgaacaagaccacgctggtcttcgtcaacacgcgcagccaggccgagatgctgttc
cagaatctctggagcatgaacgacgacggccttgcgattgcgctgcatcacggctcgctc
gacgtcgcccagcgccgcaaggtcgaggacgccatgtcggcgggacgcctgcgcggcgtg
gtctgcacctcctcgctcgatctcggcgtcgactggggcgacgtcgatctcgtcgtcaat
atcggcgcgcccaagggctcctcgcgcctgatgcagcggatcggccgcgccaaccaccgc
ctcgacgaggcctcgcgcgcggtgctggtgccggccaaccgtttcgaggtgctggagtgc
cgcgtcgccatcgatgccatcgccgagaacgcgcaggacacgccgcccttgcgcaaaggt
ggcctcgacgtgctggcgcagcacgtgctcggttgcgcctgcggcgagccgttcctctct
gatgaactctatgccgaagtgcgcaccgccgcgccttacgcagacttgtcgcggccggat
ttcgacgacgtcgtcgatttcgtcgcctccggcggctacgcgctgaagacctatgagcgc
tttgcccgcatcaagcaggacaaggagggtcgctggcgcgtcgccaatcccaaggtgcgg
cagagctaccggatgaatgtcggcaccatcgtcgaggacgacatgctgaaggtgcggctg
gttcgctcgcgcggcggtggccaaggaaaggcaggcggctctacaggcgtgatcgcgcgg
ggcggccggttgctcggcgagatcgaagaggccttcatcgagggcctctcgcccggcgat
accttcgtgttttcaggcgaggtggtgcgctatgagaccctggtcgaggatcaggtctat
gtctcgcgcgcgcatgacaaggacccgaaagtgccgtcctatatgggcggaaaattcccg
ctctcgacctatctcgccgaacgcgtgcgccggctgctcgatgacgcgcgcgcatggcgt
ggcttgccggagcaggtgcgcgattggctgtcgctgcagaaggacgtcagcagcgtgccg
gcggtgcgcgaactcctggtcgaaagctttccgcgcgccaacaagcactacatcgtctgc
tatcccttcgagggacgtctcgcgcatcagaccctcggcatgctgctgacgcgccggctg
gagcgcgcccgcgctcggccgctcggcttcgtcgccaatgaatatgcggtggcgatctgg
gcgctcggcgatctctccttcatgatccgtgatggccggatcgatctcaacgcgctgttc
gatcctgatatgctcggcgacgatttggaagcctggctcgccgaatccgccctgatgaag
cgcaccttccgcaactgcgcgatcatctccggcctgatcacacgccggcataccggcgag
gagaagagccgtcgtcaggtgttgttctcgaccgatctcgtctacgacgtgctgcgcaag
catcaggccgatcacgtcctgttgcgcgccgcgcgcgccgatgccgccaccggcctgctc
gatttgcgccgtctcagcgacatgctggtgcgcatccacggccggatcacgcaccgggaa
ctcgaccgcgtctccccgctggccgtgcccgtgatgctggaaatcggtcgcgagtcagtt
tatggcgaagctgcagacgagcttttggcggaagccgccgatgagctcgtcaaagaggcg
atggatagaagcgggtaa

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