Bradyrhizobium symbiodeficiens: CIT39_31885
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Entry
CIT39_31885 CDS
T06284
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00020
Citrate cycle (TCA cycle)
bsym00190
Oxidative phosphorylation
bsym00650
Butanoate metabolism
bsym01100
Metabolic pathways
bsym01110
Biosynthesis of secondary metabolites
bsym01120
Microbial metabolism in diverse environments
bsym01200
Carbon metabolism
Module
bsym_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bsym_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bsym_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIT39_31885
00650 Butanoate metabolism
CIT39_31885
09102 Energy metabolism
00190 Oxidative phosphorylation
CIT39_31885
Enzymes [BR:
bsym01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CIT39_31885
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
DAO
Thi4
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AWM10593
UniProt:
A0A2U8QKE1
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Position
complement(6695861..6697696)
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AA seq
611 aa
AA seq
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MATETNGKGNGAPATNGKAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLKTACITKVFP
TRSHTVAAQGGISASLGNMHKDDWRWHMYDTVKGSDWLGDQDAIEYMVRNAPDAVYELEH
WGVPFSRTEDGKIYQRPFGGMTMDFGKGQAQRTCAAADRTGHAMLHTMYGQSLRHAAEFF
IEFFAIDLIMDDQGTCRGVIALKLDDGTLHRFRAQTVILATGGYGRAYASCTSAHTCTGD
GGGMVLRAGLPMQDMEFVQFHPTGIYGSGCLVTEGARGEGGYLVNSEGERFMERYAPSAK
DLASRDVVSRAMTIEIREGRGVGKKKDHIFLHLDHLDPAVLAERLPGISESAKIFANVDV
TREPIPIVPTVHYNMGGIPTNYHGEVLTKKDGDDNAIIPGLMAIGEAACVSVHGANRLGS
NSLIDLVVFGRAAALRLAEKLTPNAKQPELPANSSDLALGRLDHYRYASGGTPTAKLREG
MQNVMQTNCAVFRTGEVLSEGQNLIAKVHSGITDIAVSDRSLVWNSDLVETLEFDNLISQ
AVVTMNSAANRTESRGAHAREDFSDRDDKNWMKHTLAWLEDSGKVKIEYRPVHDYTMTND
VQYIPPKARVY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagaccaatggcaagggcaacggcgctcccgccacgaacggaaaagcctat
ccgatcgaagaccacacctatgacgtcgtcgtggtcggtgccggcggcgcgggactgcgc
gccgtggtcggctgcagcgaagcgggcctgaagacagcctgcatcaccaaggtgtttccg
acccgctcgcacacggtcgctgcgcagggcggcatctccgcctcgctcggcaacatgcac
aaggacgactggcgctggcatatgtacgacaccgtgaaggggtcggactggctcggcgac
caggacgcgatcgaatacatggtgcgcaacgcgcccgacgcggtctacgagctcgagcat
tggggcgttccgttttcgcgcaccgaggacggcaagatctaccagcgaccgttcggcggc
atgaccatggacttcggcaagggccaggcgcagcgcacctgcgccgccgccgaccgcacc
ggtcacgccatgctgcacacgatgtacggccagtcgctgcgccacgccgccgaattcttc
atcgagttcttcgccatcgacctgatcatggacgaccagggcacttgccgcggcgtcatc
gcgctcaagctcgacgacggcacgctgcaccgcttccgcgcccagaccgtgatcctggcg
acgggcggctacggccgcgcctacgcctcctgcacctcggcccatacctgcaccggcgac
ggcggcggcatggtgctgcgcgccggcctgccgatgcaggacatggagttcgtgcagttc
cacccgaccggcatctacggctcgggctgtctcgtcaccgagggcgcgcgcggcgaaggc
ggctatctcgtcaactccgagggcgagcgcttcatggagcgctatgcgccgtcggccaag
gacctcgcttcgcgtgacgtcgtctcgcgcgcgatgaccatcgagatccgcgagggacgc
ggcgtcggcaagaagaaggatcacatcttcctgcatctggatcatctcgatcccgcggtg
ctggccgagcggctaccgggcatctccgaatccgcaaagatcttcgccaatgtcgatgtg
acgcgcgagccgatcccgatcgtgccgaccgtgcactacaacatgggcggtatcccgacc
aattatcatggcgaagtgctgaccaagaaggacggtgacgacaacgccatcatccccggc
ctgatggcgatcggcgaagccgcctgcgtctcggtgcacggcgccaaccgcctcggctcc
aactcgctgatcgatctcgtcgtgttcggccgcgccgcggcgctccgtctcgccgagaag
ctgacgccgaacgccaagcagcccgagctgccggcgaactcgtcggatctcgcgctgggt
cgcctcgaccattaccgctacgcctccggcggcacgccgaccgcgaagctgcgcgaaggc
atgcagaacgtgatgcagacaaattgcgcggtgttccgcaccggcgaagttctgagcgaa
ggccagaacctgatcgcgaaggtccacagcggcatcaccgacatcgccgtgtccgaccgc
tcgctggtgtggaattccgacctcgtcgaaacgctggaattcgacaatctgatctcgcag
gcggtggtgacgatgaactcggccgccaaccgcaccgagagccgcggcgcgcatgcgcgc
gaggacttctccgaccgcgacgacaagaactggatgaagcacacgctggcctggctggag
gattccggcaaggtcaagatcgagtatcgcccggttcacgactacaccatgaccaacgac
gtgcagtacatcccgcccaaggcgcgcgtttactaa
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