KEGG   Bos taurus (cow): 512530
Entry
512530            CDS       T01008                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
bta  Bos taurus (cow)
Pathway
bta03013  Nucleocytoplasmic transport
bta04141  Protein processing in endoplasmic reticulum
bta04150  mTOR signaling pathway
bta05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    512530 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    512530 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    512530 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    512530 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    512530 (SEC13)
   04131 Membrane trafficking [BR:bta04131]
    512530 (SEC13)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     512530 (SEC13)
Membrane trafficking [BR:bta04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    512530 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    512530 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    512530 (SEC13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 512530
NCBI-ProteinID: NP_001069033
BGD-bta: BT20534
Ensembl: ENSBTAG00000017825
VGNC: 34403
UniProt: Q3ZCC9
LinkDB
Position
22:complement(54326136..54361315)
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGPVSTSVTEGQQNDQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggacacttcccatgaggacatgattcatgacgcccag
atggactactacggcacccgcctggcaacctgctcgtcagacaggtccgtcaagatattc
gatgtgcgcaacggggggcagatcctcgtcgccgacctcaggggccatgagggtcctgtg
tggcaggtggcctgggcccaccccatgtatggcaatatactcgcgtcctgctcctacgac
cggaaagtcatcatctggaaagaggagaatggcacctgggagaagacccacgagcacaca
ggacacgactcgtcagtaaactccgtatgctgggctccccacgactatggcctcatcctg
gcctgcggcagctcggacggggccatctccctgctgacctacaccgggctgggccagtgg
gaagtaaagaagatcaacaatgctcacaccatcggctgcaatgctgtcagctgggcccct
gctgtcgtacccggaagcctcatagaccagccatccgggcagaagcccaactacatcaag
aagtttgcgtcaggcggctgtgacaacctcatcaaactgtggaaggaggaggaggacggc
cagtggaaggaagagcagaagctggaagcccacagtgactgggttcgagatgtggcctgg
gccccctccatcggcctgcctaccagcaccatcgccagctgctctcaggacggtcgggtg
ttcgtctggacctgtgacgatgcctcgggcaacacgtggtctcccaaactgctgcacaag
ttcaacgacgttgtgtggcatgtcagctggtccatcacagccaacatcctggcggtctct
ggtggagacaataaggtgaccctgtggaaggagtcggtcgatgggcagtgggtgtgcatc
agcgacgtcaacaagggccagggacccgtgtccacgtctgtcacggagggccagcagaac
gaccagtga

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