Bos taurus (cow): 789597
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Entry
789597 CDS
T01008
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X2
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
bta
Bos taurus (cow)
Pathway
bta04015
Rap1 signaling pathway
bta04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
789597 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
789597 (RAPGEF6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
789597
NCBI-ProteinID:
XP_002689011
BGD-bta:
BT15107
Ensembl:
ENSBTAG00000000682
VGNC:
110062
LinkDB
All DBs
Position
7:22826288..23055066
Genome browser
AA seq
1600 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQVLFCSETIARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDNILQREIPARQSRRRFRKINCKGERQTITDDVDINSYLSLPADLTKMHIADNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEDI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAVILEDGQELDSWYVILNGTVEISHPDGKVDNLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKGT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLASPLDVGTKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLSGGSEKGFGIFVESVEPSSKAADAGLKRGDQVMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDLEQTSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCQA
IHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLESKTGNTHL
KEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
SVARLRGTWEKLPSKYDKHFQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRSLSQGSTNSNMLD
VQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKFQMMSLQWEPAYGT
LTKNLNEKKSMKSSEMSPVPLRSAGQTTKAHLHQPHRGSQVLQVPAVNLHPIRKKGQGKD
PATLSTGLPQKILGTAEEVSGGKKHTEDTVSVASSLHSSPPVSPQGSPRKGYTLIPSAKS
DNLSDSSHSEISSRSSIVSNCSVDSMSTALQDERCSSQAVAVPESTGALEKTEHSSGIGD
HSQLGPGWTLSKPSLINKSLAVSSSVSNEEISHEHIIIETADSGRGSWTSCSSSSHDNFQ
SLPNPKGWEFLNSYRPTHLDGPIAEVEPTDCEHYSCPKGCSRTCGQCKGSLETNQMRQSW
ASSSSLSDTYEPNYGTVKRRVLENTPAESSEGLDHKEGIDPVYKTVTSSTEKGLIVYCVT
SPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLKPPEYSVAVQRSKMMHNSLSRLPPAS
LSSSPVACVPSKIVIQPQRHKLDVTDGDSEADENEQVSAV
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacctgtggatcctggcgctaggcaggcgctgaagaagaagccgccagagcgg
acgcccgaggacttaaatactatttattcttatcttcatggaatggaaatattatcaaat
ctcagggaacatcagcttcgattgatgtctgcaagagcacgctatgagagatacagtggc
aatcaagttcttttttgttcagaaactattgccagatgttggtatatcctgctttctgga
tctgtgcttatgaaagactccatggttttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagataatattctacaaagagaaattcctgccagacagtctcgaaga
agatttcggaaaattaattgtaaaggagaacgccagactattactgatgatgtggatatt
aacagctatctttctcttccagccgatcttaccaagatgcacattgcagacaaccctcat
ccacaggtgactcacgtgtcttctagtcagtctggctgtagcatcgccagtgactctgga
agcagcagtttatctgatatctatcaggctaccgaaagtgaggtaggagatgtcgattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagatgaagacatt
gatcgaacagatcctctgcaagggcgggatcttgtccgagaatgtcttgaaaaagaacct
gcagataaaactgatgatgacattgaacaattgctggagtttatgcaccagcttcccgct
tttgcaaatatgaccatgtctgtaaggagagaactctgctcagtgatgatttttgaagtg
gtagagcaggctggagctgtcattcttgaagatgggcaagagcttgattcatggtatgtt
attttaaatggcactgtggaaatcagtcatccagatggaaaagttgacaatctctttatg
ggaaatagttttggaatcacacccactctggataaacagtacatgcatggagttgttagg
actaaagtagatgactgtcagtttgtctgcatagcccagcaggattattggagaatttta
aaccatgttgaaaaaaatacccataaagttgaggaagagggagaaattgttatggtacat
gagcatcgtgaactggatcgaagtggaaccaggaaaggacacattgtaattaagggaaca
cctgagcgtctcatcatgcatttaatagaagagcattccattgtggacccaacttatata
gaagatttcctattaacttacagaacatttcttgcaagtcctttggatgttgggaccaaa
ctgttggaatggtttaaaattgacagcttaagggataaggtaacacggattgtattatta
tgggtaaataatcatttcaatgattttgaaggtgatcctgctatgactcgatttctagag
gaatttgaaaaaaatctggaagatacaaaaatgaatggtcatctccggttattgaatatt
gcgtgtgctgcaaaggctaagtggagacaggttgtgctgcagaaagcttcccgggagtca
cctctgcatttcagcctaagtggaggaagtgagaagggatttggtatttttgttgaaagc
gtagaacctagtagcaaagctgctgatgcaggactgaaacgtggtgatcaagtaatggaa
gtaaatggacaaaattttgagaatataacgtttgtgaaggcccttgaaattttgaggaat
aatactcatcttgcacttactgtaaagaccaacatttttgtgttcaaagagttacttagt
aggactgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccactcaatccaggatgtaccaggagatcttgaacagacatcacaggagaaagga
aataagaaaataaaagcaaataccgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgatttagtatcttgcctccaaaactttttagtgatggaggcctgagccag
tcacaggatgacagcattgtgggaacgagacactgcaggcacagtctggccatcatgcct
atccctggaacactctcgtccagcagccccgacctcctccagcctaccaccagcatgttg
gatttttctaatccctcagatattcctgatcaagttataagagttttcaaagcagatcag
caaagttgctacattatcatcagtaaagacactacagctaaggaagttgtctgtcaagct
attcatgaatttggtttgactggtgcatctgacacatactctctctgtgaagtttctgtt
actcctgagggtgttataaaacagagaagacttccagaccaattctccaaattagctgat
agaattcagctcaatggaaggtattatttgaaaaataacatggaaacagaaaccctatgt
tcagatgaagatgctcaagaactagttaaggaaagccagctgtccatgctacaactaagt
actattgaggtggccactcagctgtcaatgagggactttgatttatttcgtaatattgag
cctactgaatatattgatgacctttttaagttagagtccaaaacaggaaatactcacttg
aaagaatttgaagacattgtaaaccaagagacattctgggttgcatcagagattttaact
gaatcaaatcagctcaaacgaatgaagattattaaacattttattaaaattgcacttcat
tgtcgagaatgtaagaacttcaattccatgtttgcaataataagtggtttgaacttggca
tctgtagcacgactcagaggtacttgggaaaagttaccaagcaagtatgataaacacttc
caagatctgcaagacctttttgatccatccagaaacatggcaaaatacagaaatattctt
agtagtcaaagcatgcagcctccaattattccactctttcctgttgtcaagaaagatatg
acatttctacatgaaggaaatgattccaaagttgatggtttggtaaatttcgagaaactc
agaatgattgccaaggaaattcgtcaggttgttcgaatgacttctgctaacatggatcca
gctatgatgttccgacagaggtcactgagtcaaggcagcacaaattcaaacatgctggat
gttcagggaggtgctcacaaaaaaagggcacgccgtagctctctgctaaatgccaagaag
ctatatgaagatgcccaaatggcaagaaaagtgaagcagtatctttccagtctggatgtc
gagacagatgaagagaagttccagatgatgtcattgcaatgggagcctgcatatggtacc
ttgaccaagaatttaaatgagaaaaaatcaatgaagtcatcagaaatgtctccggtgcca
ctgaggtcagctggccaaacaactaaagctcatttgcatcagcctcacagaggaagccag
gtgcttcaggtgccagctgtaaatttgcaccctatcaggaagaagggccaaggaaaagac
cctgccaccctgagtacaggtttacctcagaaaattttaggaacagctgaagaagtaagt
ggtggtaagaaacacacagaagacaccgtttctgtggcatcatccttacattccagccct
cctgtgtctcctcaaggttccccccgcaaaggttatacacttataccatcagctaaatct
gacaacttgtctgactccagccacagtgagatttcttcacggtccagcattgtgagcaat
tgttctgttgactccatgtctacagctctacaggatgaacggtgttcctcccaggctgtg
gcagtccctgaatccactggagcattggaaaagacagagcactcctcagggataggagac
catagtcagcttggccctgggtggacactctcaaagccatctctaatcaacaagagttta
gctgtctcatcttctgtgagcaatgaagagatttctcatgagcacatcattatagaaaca
gctgatagtggtcgtggaagttggacttcctgctcaagcagttcccatgacaacttccaa
agtcttccaaaccccaaaggctgggagtttttgaactcttaccgacctacccatttggat
ggtcccatagctgaagttgaacccactgactgtgagcactacagctgtcccaaaggctgc
tctcgaacttgtggtcagtgtaaaggaagcctagagactaatcagatgagacagagttgg
gcttcctctagttctctgtctgacacatacgaaccaaactatgggacagttaaacggaga
gtgctggagaacaccccagctgaatcatctgaaggcttggaccacaaagagggcatcgac
ccagtctataaaactgttacttcaagtacagaaaagggcttgattgtgtactgtgtcacc
tcacccaagaaggaggataggtatagggagccacctcccactcctccaggatacatgggg
atttctttagcggacctaaaggaaggaccccacctccacctaaaacctccagagtatagt
gtggcggtgcagaggtcaaagatgatgcataacagcctctctagactgccaccagcttct
ctcagtagcagccctgtggcctgtgttccatcgaagattgtaattcagcctcagaggcat
aaactagatgtgactgatggagatagcgaagcagatgaaaatgaacaggtttcagcagtg
tag
DBGET
integrated database retrieval system
