Bombus terrestris (buff-tailed bumblebee): 100648111
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Entry
100648111 CDS
T04364
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100648111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bter03036
]
100648111
Chromosome and associated proteins [BR:
bter03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100648111
REST complex
100648111
Heterochromatin formation proteins
Other heterochromatin formation proteins
100648111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
100648111
NCBI-ProteinID:
XP_003400052
UniProt:
A0A9B0F727
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Position
LG B13:4135415..4153445
Genome browser
AA seq
1518 aa
AA seq
DB search
MKRVRGLDEVASPAAATLKHSSVSAGSGGGGSLEYHSSSGIGVVVPGQAVRSVASKEMPG
SIQFGTAQAQQQYTGAIVVPTAAPSPIKGSGSAGLTSTCSSSSVNTGGGLHGGIGGGSNH
SMGSQQPTPGTQSQVHTQQQPTIRHKVHSSNVTPLASTPPGTSLGGGSGSQQFQRLKVED
ALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFNTF
LPPGYKIEVQANEQGYAFQVSVSMPSPTATHTCTSLSQHHCTVNVGSPPVASPPTQPAKA
PPVLQIMQGTGNIHHSLANNISNNSLTVHAPSPPPVQAYNNSHVSAAQAQAVSQALSQAQ
DGIPTSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGH
MGGTSGSGASGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSNKTATV
NDHTTIVKKPLGPKAPYNNSGNISRDLRESSGTSTIERENRDHRDRDRERDRSGIRDINS
VQKFGHNTGQLKRSPSFSPSVTAGNSHHIQHGPPLKKPKVSSMRECVTIAEAGKYGSLND
YAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFKDFLG
HLPESSSTNTTNASGNLNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCALPKS
YVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELDGVIE
TNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADIIDGL
KKNPVVAVPVVLRRLKSKEEEWREAQKGFNKLWREQNEKYYLKSLDHQGINFKQNDVKAL
RSKSLFNEIETLYDERHEQVDDGSGDGQNNSGPHLVLPYKDKSVLDDAANLLIHHVKRQT
AIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDLNVAACSNSQSVTMNTSP
LGGGGLQANRNKAPVSPIPSSTSIKTEPDIKVPIHAMSDDPEEAYTLFMGSNNWYLFLRL
HHILCERLTKMYDRAVALAEEESRYKQQRKESTAVALRLKPKNEIEIEDYYPAFLDMVKN
VLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDLICQQCMELFQREQ
RQPKESSGAGGLCATAYMRLGAEMSYQRKAEKAMADENCFKVYIYKKDCKMTMELLDTEG
DEAMDNSCREREREGVTVSEKWSTYVERFSAPAGQTSPKDTPTLTDNEPTTNHPMDGNGW
SSLGRILAGRKPVFLYRNIRQWRKKAARMMSASVSNTNQPDKAAGSTDKEKSLDSVDALL
KRPPGLRLADSGDTSDIINSDETQCRFNPNSYQMLYIASKEAFLYKQNSFSRARECHPAV
TKHLNSKFHQWLAAWVSKNVADVQHRLCQDWLMGRYENLIPHKTRVITDNDQTRTPYRQY
NRYRVERLQPDPLTEPSV
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgcgggctggacgaggtagcatcaccagcagcagcaacattaaagcac
tcgtcagtgagtgcaggaagtggcggaggaggtagtttggagtaccattcaagcagtgga
ataggcgttgttgtacctggccaagcagttcgatcagttgcttcgaaagaaatgccgggc
agcatacaatttggaactgcccaagctcaacagcaatatactggagcaattgtagtgccg
accgcggccccgtcccccattaagggaagtggatctgcaggactcacttctacatgtagc
agtagcagtgtaaatactggtggaggtttacatggtggaataggtggtgggagtaaccat
agtatgggttcccaacagcctacaccaggaacacaaagtcaggttcatactcaacagcaa
ccaacaataaggcataaggttcattccagcaatgtaacaccattagcttctaccccacca
ggcacaagcctaggtggtggcagtggttcccaacaatttcagagattaaaagtagaagat
gcgttatcttatttagatcaagtaaagtacaaattcagtgatcagcctcaggtgtataat
gatttcttggatattatgaaagaatttaagtctcaaagcatagatacaccaggagtaata
acaagagtgagccatttatttaaagggcaccctgaacttattgttggttttaataccttt
cttccacctgggtacaaaatagaggtgcaagctaatgagcaaggatatgcatttcaagtg
tcagttagtatgccaagtccaacagcaacacacacttgcactagcttgtcacagcatcat
tgcactgtgaatgttggttcacctcctgttgcaagtccaccaacacaaccagcgaaagct
cctccagtattgcagataatgcaagggaccggaaatatacaccactctctggcaaataat
atttcgaataatagtttgacagtacatgcaccttcaccaccaccggtacaggcatacaat
aattcacatgttagtgcagctcaagcacaagctgtgagtcaagcgttaagtcaagcacaa
gatggtatacccaccagtggacaaactcaacaaagccaaccagttgagtttaatcatgcg
attaattacgttaacaaaattaagaatcgattccaaggtcaacccgacaagtataaaaga
tttttagaaattctgcatacttatcagaaagagcagcgaaatttaaaagaatctggacac
atgggtggtaccagtggatctggtgcatctggtggagcaaaacatttaacggaagcagaa
gtttatagccaagttgccaagttatttgaaaatcaagaagatttgttggctgagtttggg
caatttttgccggatgctactaatcaacagagttcgttgagtaacaagactgctacagtt
aatgatcacacaacaattgtcaagaaaccattgggacctaaagcaccttataataattcg
ggaaatatttcgagagatcttcgagaatcgagcggtactagtacaatagaacgtgaaaat
cgcgatcatagagatcgtgaccgagagcgagatagatctggtatacgagatattaatagc
gtacaaaaatttggccataatacgggacagttgaaaagaagcccgtcgttttcgccttcg
gtaacagccggaaactctcaccatatacagcatggtccacctctgaaaaagcctaaagta
tcgtctatgcgtgaatgtgttaccatagccgaagctggaaaatatggcagtctcaatgat
tatgctttcttcgataaggttcgtaaagcattgagatcgcaagaagtatacgaaaatttc
cttagatgtttggttttgtttaatcaagagatagtttctaaatctgagttggtgcagtta
gtaacgccatttcttggtcgttttcctgaactattgcggtggtttaaagatttcctgggc
cacttacccgagtcttctagtaccaacacaacaaatgcaagtggcaatttaaatgttgaa
gcgctaccaaataatgttgtacgaagtcatcaagagagaccgcaaggtgatctggcgatg
gaaattgactacacggcatgcaagcgtctaggggcatcatactgtgcgttaccaaagtct
tacgttcaaccaaagtgtacaggaagaacgcaactgtgtaaagaagttcttaacgataca
tgggtttcattcccgacttggtcagaagatagtacattcgtaacatccaggaaaactcag
tacgaggaattcatttatcgttgcgaggatgaacgatttgagttggatggcgtaatagaa
actaatgcgtcgacgatcagagttctcgagggtgtccataagaaaatgagtagaatgagc
caagaagaacttcagaaattcaagctcgacgattgtctcggtggttgttcgcctacaatt
catcagagagccttgaagaggatatacggcgataaggcggctgacattatagatggtctt
aagaaaaatcctgtagtagcagtaccagtagttcttcgtcgattaaagagtaaggaagaa
gagtggcgggaagcgcaaaaaggtttcaataaactctggagagaacaaaacgaaaagtac
tacttgaagtctctggatcatcaaggtatcaatttcaagcagaacgatgttaaggcccta
aggtccaagagcctatttaatgaaattgaaacgttatacgatgagagacacgagcaggta
gacgatggtagcggggatggtcaaaataatagcggcccacaccttgtattaccttacaaa
gataagtctgtcctagatgatgcagctaatcttcttatccatcatgtaaagcgtcaaacg
gccatccacaaggaagacaagcaacgaataaagcttttgttgaagcattttatacctgat
cttttcttccatccacgccaggaactgagtgacgacgaaagggatgaagacgatgagaag
gaagatctcaatgtagcagcgtgtagtaattctcagtcagtaacgatgaatacctctccg
ttgggtggtggtggcctccaagcaaataggaataaggcgccggtatctccgattccgtct
tccacgtctattaaaaccgaacctgatatcaaagtaccaatccatgcgatgtcggatgac
cctgaagaagcgtacacgctcttcatgggcagcaacaattggtacctttttttaaggtta
catcatatattatgtgaaagattaacaaaaatgtacgaccgggctgtggctcttgctgaa
gaggaatcacggtacaaacagcagcgtaaagagagcacagctgtcgcactacggttaaaa
cctaaaaatgaaattgaaattgaagattactatcctgcatttttggatatggttaagaat
gttctagacggtaatatggaaagtaccgcatacgaggataccttacgagaaatgttcggt
attcacgcatatatcgcttttacgttagataaggttgtaacatacgctgtgagacaattg
cagcatttggtctcagatcttatatgccagcagtgtatggaattattccagcgagagcaa
cggcaaccgaaagaaagtagtggcgcaggtggtttatgtgctacagcgtacatgagactc
ggtgcagaaatgtcgtatcagcgtaaagctgaaaaggctatggcggacgaaaattgtttt
aaagtatacatttataagaaagactgtaaaatgacaatggaattgttggatacggaaggt
gatgaagcgatggacaacagttgtagggaaagagaaagggaaggagttacggtatctgaa
aagtggtctacatatgttgagaggttttctgctccagctggtcagactagcccgaaagac
acccctaccttaacagacaatgagccaacaaccaatcatcctatggatggaaatggttgg
agttctttaggcagaatcttggcaggacgtaagcctgtatttctttaccgtaatattaga
cagtggaggaaaaaagctgcaagaatgatgtcagcatcagtgtctaacaccaatcaacca
gataaagcagcaggatcaactgacaaagaaaaatcactggattctgtagatgcgctccta
aagcgacctcctggtttaagattagcagattctggggatacatctgacattatcaattcc
gatgaaacccagtgtagatttaatcccaatagttaccaaatgctttatattgctagtaag
gaagcattcctgtataaacaaaattctttcagtcgtgccagagagtgtcatccagctgtt
acaaaacacttgaattcaaagtttcatcaatggctggcggcttgggtatccaagaatgtc
gcagatgttcaacaccgattatgtcaggattggttgatgggacgttatgaaaacttaatt
cctcataaaacacgagtgatcacggacaatgatcaaacgagaacgccttatcgacaatac
aatcgttatcgagtggaacgcttgcaacccgatcctctgacggaaccaagtgtataa
DBGET
integrated database retrieval system