Bacteroides thetaiotaomicron VPI-5482: BT_0245
Help
Entry
BT_0245 CDS
T00122
Name
(GenBank) ATP-dependent exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bth03400
]
BT_0245
DNA repair and recombination proteins [BR:
bth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BT_0245
Archaeal homologous recombinant proteins
BT_0245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
ABC_tran
AAA_25
MMR_HSR1
AAA_22
AAA_16
DUF87
RsgA_GTPase
HEPN_RES_NTD1
Motif
Other DBs
NCBI-ProteinID:
AAO75352
UniProt:
Q8AB66
LinkDB
All DBs
Position
269319..272183
Genome browser
AA seq
954 aa
AA seq
DB search
MKIIAIRLKNLTSIEGSVEIDFTMEPLSSAGIFAISGATGAGKSTLLDALCLALYDKAPR
FAASVESINLADVGDNQINQSDVRNLLRRGTSDGYAEVDFQGVDGHRYRSRWSVRRTRNK
ASGSLQPQVLEVKDLDTEKEFQGTKKELLAQLVELVGLTYEQFTRTVLLAQNDFATFLKS
RGAAKAELLEKLTGTGVYSRISQEIFARNKAAQEEVTMIQSKMSVIELLPEEELLTLQNE
KEQLVEKRAAGIKLLAELNAQLNVVRSLKMQEALWVKKQQEEQEELNKQKNLQDALVVQE
EGLIHFKAQWEAIQPDLKKARQLDVQIQSQQAGYIQSQQILQAARQQVADQEKKSASAIE
QLRISYHSLSRLLNRTDVESLQLEQIEVILNEEKDTLETWTKVNEERLGRLNSFGYPSLV
DEQGKIQKELTRLQNIKKLTEEQSKSKQDIEKLEKEVTVCTQQLAEQDTVVKALQRLYEN
ARMAVGKDVKALRQQLQEGEACPVCGSTTHPYHREQEVVDTLYRNMEQEYNTAVSAYQQI
NNRSIALQRDLTHQRATEVQIKEQLSVLQQEGLPAGEEDQIQNRLNELAERISAYQHLYA
EWQQNDEKIKKLRTYCDALRENVSQCRLAAQKVSAAKEQSAILQKAAIDEQQRFEVIAKA
LDALRQERSLLLKGKSADEAEAAVARREKELNEALEKARKQVEGVQNHLSGLQGEMKQLS
VVIEELREQQKGIELPDQLPQTIAKQQEDNLNTERALSIAEARLLQQAKNKTIFEQITKE
LTEKQAVAVRWAKLNKLIGSADGAKFKVIAQSYTLNLLLLHANKHLAYLSKRYKLQQVPD
TLALQVIDCDMCDEIRTVYSLSGGESFLISLALALGLSSLSSNNLKVESLFIDEGFGSLD
ADSLRTAMEALEQLQMQGRKIGVISHVQEMSERISVQVQVHKKINGKSVLTVVG
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatagcaataagattgaagaatctgacttcgatagaaggcagtgttgaaata
gattttacgatggaaccgttatcttcggctggtatatttgcaatttccggtgctacagga
gcgggaaagtcgactttgttggatgctctgtgtctggcattatatgacaaggctcctcgt
tttgcggcttcggtggagagtatcaatctggcagatgtgggagataaccagatcaatcag
tcggatgtgagaaatctgcttcgtcgggggacgagtgacggatatgcggaggtcgatttt
caaggagtggacggacatcgatatcgttcccggtggtcggtcagacggacaaggaataag
gcgagcggttctttacagcctcaagtgctggaggtgaaagatttggatacggaaaaagaa
tttcagggaacgaagaaagaattgctggcacagttggtagagttggtcggtttgacgtat
gagcaatttacccgtaccgtattgctggcacaaaacgactttgcaacttttctgaaatcc
agaggggcggcgaaagcggaactactggagaagttgacgggaacaggtgtttattcccgc
atctctcaggagatttttgcccggaataaggctgcacaagaagaggtgacgatgattcaa
agtaagatgagtgtgattgagttgttgccggaggaagaacttttaaccttgcagaatgag
aaagaacagttggttgagaaacgtgcggcagggattaaattgctggcagaactgaatgcg
caattgaatgtggtccgttcattgaaaatgcaggaagctctttgggtgaaaaagcagcag
gaagagcaggaggaactgaataaacaaaagaatctacaggatgctttggttgttcaggaa
gaaggactgattcattttaaagcgcagtgggaagcgatacagccggatttgaaaaaggca
cgtcagctagatgtacaaatacagtcgcagcaggcggggtatatacagtctcaacaaatt
ttgcaggctgcccgtcagcaggtggcggatcaggagaagaaatctgcatctgcgatagag
cagttacggatctcctatcattctttgagtcgtctgttgaatcgtacagatgtggagtca
ctgcagctggaacagattgaagtcatccttaacgaggaaaaggatacattggaaacatgg
acaaaagtgaatgaagaacgccttggccggttaaattctttcggttatccttctttggta
gatgagcagggtaagattcaaaaagaactgacgcgcttgcagaatataaagaaattgact
gaagaacaatcgaagtcgaagcaggatatagagaaactggaaaaggaagtgactgtttgt
acacagcagttggcagagcaggatactgtagttaaagccttgcagcggctttatgaaaat
gcccgtatggcggtaggaaaggatgtgaaagcattgcgtcagcagttgcaggaaggggag
gcttgtccggtttgtggaagtacgacacatccttatcatcgggaacaagaggtagtggat
actctttaccggaatatggaacaggaatataataccgcagtgtctgcttatcagcagata
aataatcgcagcattgccctgcaacgagacttaacccatcaaagagcaactgaggtacag
ataaaagaacagttgtccgttttgcaacaagaaggattgccggctggagaggaagatcag
atacagaatcggttaaatgagttggcggaacgtatttcagcttatcagcatctgtatgcg
gaatggcagcagaacgatgagaaaataaagaaattgcggacatactgtgatgctctgcgt
gagaatgtctcgcagtgtcgtttggctgcgcaaaaggtatcagccgctaaagaacagtcg
gctattttacagaaagcagctattgatgagcaacaaagattcgaagtgatcgctaaagcg
ttggatgcactccgacaggaacgttctttgttattaaaagggaagagtgcggacgaagct
gaggctgctgttgcccgaagagaaaaagaattgaatgaggcgttggaaaaggctcgtaaa
caagtggagggagtacaaaatcatctttccggtctgcagggagaaatgaaacaattgtcc
gttgtcattgaagaacttcgggagcaacagaaaggtatcgaacttccggatcagcttcct
cagactatagcgaaacaacaggaagataatcttaatacggaacgtgcgctgtcgattgcg
gaggcacgtctgttgcagcaggcaaagaataaaacaatctttgagcagataaccaaggag
cttaccgaaaagcaggcagttgccgtacgttgggctaaattgaataaattgattggtagt
gccgacggtgcgaaatttaaagtcatagcccaaagttatactttaaatctgttattgctc
catgccaacaaacatttggcttatctttccaagcggtataagttacagcaagtccccgat
acactggcgcttcaggtgattgattgcgatatgtgtgatgagatacgtacggtatattcg
ctttcgggaggtgaatctttcctgatttcactggcacttgcattgggcttatcttcgctt
tcgagcaataatctgaaagtagaatccctgtttatcgacgaaggattcggctcgttggat
gctgacagtctgagaacagccatggaagctttggagcagctacagatgcagggacggaaa
atcggagtcatttcccatgtacaggaaatgagtgaacgtatttcagttcaggtgcaggta
cataagaagatcaatggaaaaagcgtgcttactgtcgtagggtaa
DBGET
integrated database retrieval system
