Bacillus thuringiensis MC28: MC28_4686
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Entry
MC28_4686 CDS
T02263
Name
(GenBank) ATP-dependent RNA helicase dbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC28_4686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btm03019
]
MC28_4686
03009 Ribosome biogenesis [BR:
btm03009
]
MC28_4686
Messenger RNA biogenesis [BR:
btm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MC28_4686
Ribosome biogenesis [BR:
btm03009
]
Prokaryotic type
rRNA helicases
MC28_4686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFU16108
LinkDB
All DBs
Position
complement(4561424..4562869)
Genome browser
AA seq
481 aa
AA seq
DB search
MSKKEFSNYALSKEIIRALTGLGYEHPTEVQGEVIPVALKKKDLVVKSQTGSGKTASFGI
PLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAVYGKSPFARQKLELK
QKTHIVVGTPGRVLDHIEKGTLSLECLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT
MLFSATLPEDVEKLSRTYMDSPTHIEIKAAGITTDKIEHTLFETREEEKLSLLKDVTTIE
NPDSCIIFCRTQENVDHVFRQLNRVNYPCDKIHGGMVQEDRFEVMDDFRKGKFRYLVATD
VAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNKGKAITFITPYENRFLEEIEAY
IGFEIPKAYAPSKEEVMKGKAVFEEKIHAKPIIKKDKSADLNKGIMKLYFNGGKKKKIRA
VDFVGTIAKIKGVTAEDIGIITIQDNVSYVEILNGKGPIVLKTMKTTTIKGKQLKVHEAI
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaagaatttagtaattatgcattaagtaaagaaataatacgagcacttact
ggtttaggatatgaacatccaacagaagtgcaaggagaggttattccagttgcattgaaa
aagaaggatcttgttgtaaaatcgcaaactggaagtggaaaaacagcttcattcggtatt
ccactttgtgaaatggtggaatgggaagagaataagccacaagcattagttttgacgccg
acgagagaacttgctgttcaagtgaaagaagatattacgaatataggccgcttcaaaaga
attaaggctgcggccgtttatggtaagtctccatttgcacgtcaaaaattagagttaaaa
caaaagacacatatcgtagtggggactcctggccgtgtgttagatcatattgaaaaaggt
accctttctttagaatgtctgaagtatttagtcattgatgaagcagatgaaatgctaaat
atgggctttattgatcaagtagaggcaattattgatgaattacctacaaagcgaatgaca
atgctattttcggcaacacttccagaagatgttgaaaagttatcccgtacgtatatggat
tcgccaacgcatattgaaattaaggctgccgggattaccacagacaaaattgaacataca
ctttttgagacgagagaagaggagaagctttcacttcttaaagatgtaacaacaattgag
aatccagatagttgtattattttttgccgtacacaagaaaatgtagatcacgtatttaga
cagttaaaccgtgttaactatccttgtgacaaaatacatggtggtatggtgcaagaagat
cgttttgaagttatggacgattttagaaaaggaaagttccgttatttagtagcgacagac
gtagctgctagaggaattgatattgataatattacacatgttattaactatgatattccg
ttagaaaaagaaagttatgtacatcgtacgggaagaacgggacgagctggtaataaagga
aaagctattacattcataactccgtatgaaaatagatttttagaagaaattgaggcgtac
atcggctttgaaattccaaaggcatatgcaccttcaaaagaagaggttatgaaagggaag
gcagtatttgaggaaaaaatacatgctaaaccaattataaagaaagataaaagtgcagac
ttaaacaaagggattatgaagctgtactttaatggtgggaagaaaaagaaaattagagcg
gtagattttgtcggcacaattgctaaaattaaaggtgttacagcagaagatataggaatt
attacgatacaggacaatgtttcttacgttgaaatattaaatggaaaaggaccaattgtt
ttaaagaccatgaaaactacaacgattaaagggaaacaattaaaagtccatgaagcaatt
aagtaa
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