Bacillus thuringiensis HD-789: BTF1_18190
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Entry
BTF1_18190 CDS
T02411
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
btn
Bacillus thuringiensis HD-789
Pathway
btn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTF1_18190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btn03019
]
BTF1_18190
Messenger RNA biogenesis [BR:
btn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BTF1_18190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AFQ27807
UniProt:
A0A9W3JQJ5
LinkDB
All DBs
Position
3542227..3543894
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AA seq
555 aa
AA seq
DB search
MKFLKNDQVAVFALGGLGEIGKNTYAVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYF
VRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKLY
EIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVGEPADLTK
MAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVDGRIIFATFASNIHRLQQ
VIEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHGKL
SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMDNGD
VLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKEFKV
AAGPDIISRGFVYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctaaaaaacgaccaagttgctgtatttgctctcggtgggcttggtgaaatc
ggtaaaaatacatacgctgttcaatttcaagatgaaattattataattgatgctggaatt
aaatttccagaggacgaacttctcggaatcgattatgtaataccagactacacttatttt
gtgcgaaacgaagataaaattaaagggttattcattacacatggtcacgaagatcatatc
ggcggaatcccttacctattacgtcaagtgaacatcccgatttacggcggaaaattagca
attgcactcatcaaaaacaaattagaagaacacggcttacttcgtaaagcaaaactttac
gaaattcaagaagatgacgttattaaattcaaaaaaacgtctgtatccttcttccgtaca
actcacagtattccagattcgtacggcgttgttgtgaaaacacctcaaggtcaagttgtt
catacaggtgatttcaaatttgatttcacaccagttggtgaaccagctgatttaacaaaa
atggctgaaatcggtaaagatggcgtgctatgtctattatctgatagtacgaacagtgaa
gttccaaactttactatgtctgagcgtcgcgttggtgatagcattcaagacattttccgt
aaagtagacggacggattatattcgcaacctttgcatcaaatattcaccgcttacaacaa
gttattgaagctgctgttgaaaacaaccgtaaagtagctgtgtttggtcgaagtatggaa
gcagcgattgaaatcggacaaaaccttggttatattcgttgcccgaaagatacattcata
gatgcatctcaactaaaccgcttaccagctaataaagttgttattttatgtacaggtagt
caaggtgaaccgatggcagcactttcacgtattgcaaacggtacacaccgccaaattcaa
attattcctggagatacagttgttttctcttcttcaccaattccaggaaatacaattagc
gtaagtcgtacaattaacatgttgtaccgcgctggcgctgatgtaattcacgggaaactt
tcaaatatccatacaagtggacacggtgggcaagaagaacaaaagttaatgttacgtcta
attaaaccgaagtacttcatgccaattcatggtgaatatcgtatgcagcgtatgcacatg
aacatagcaaatgattgtggtatccctgaagaaaattgcttcattatggataatggcgat
gttcttgctttacgttctgatgaagctagcgtagctggaaaaatcccatctggttcggtc
tacattgatggaaacggtattggggatatcggcaatatcgtattacgagatcgtcgtatc
ctttctgaagaaggacttgtaattgtagttgtaagcattgatatgaaagaatttaaagtt
gcagcaggacctgatatcatctcacgcggtttcgtttacatgcgtgaaagcagcgattta
atcaatgatgcacaaacattaattacaactcatttagaaaaagtaatggagcgtaaaaca
acacaatggtctgaaattaaaaatgaaattacagacacattagctccattcctatatgag
aaaacgaaacgccgtccaatgattttaccaatcattatggaaatataa
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