Burkholderia thailandensis 2002721723: BTQ_1003
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Entry
BTQ_1003 CDS
T03111
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
btq
Burkholderia thailandensis 2002721723
Pathway
btq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTQ_1003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btq03019
]
BTQ_1003
Enzymes [BR:
btq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTQ_1003
Messenger RNA biogenesis [BR:
btq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTQ_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
UTP25
Motif
Other DBs
NCBI-ProteinID:
AHI73140
LinkDB
All DBs
Position
1:1134547..1135992
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AA seq
481 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVA
EGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSL
CSPNERKQLADIEKLIKRTLSLETLELDLPRHRHDERGGRRERERDERRGASAGRRSAGG
ERAHHPRREAPIDDFFLKPYVPSSSANQPEEAKPAQPEKKAPKQPLAALLGGFGMPRKTS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgttgccaagcctgtcgacgcgacgttcgatcaattcggccttgccgcc
gagatcctgagagcgattgccgagcagggctatacgacgccgacgccgatccaggcgaac
gcgattccggtcgtgctgtccggccgcgacgtgatgggcgccgcgcagaccggcaccggc
aagaccgcgagcttctcgctgccgatcatccagcggctgctgccgcaggcgaacacgagc
gcgtcgccggcgcgccacccggtgcgcgcgctgattctcacgccgacccgcgagcttgcc
gaccaggtcgccgcgaacgtgcatgcgtatgcgaagcacacgccgctgcgcagcgccgtc
gtgttcggcggcgtcgacatgaacccgcagatggccgaactgcgtcgcggcgtcgagatc
ctgatcgcgacgcccgggcgcctgctcgaccacgttcagcagaagaccgcgaatctcggc
caggtgcagatcctcgtgctcgacgaggcggaccggatgctcgacatgggtttcctgccc
gatctgcagcgaattctgaacctgctgccgaaagagcgtcagacgctgcttttctcggcg
acgttctcgcccgagatcaagaagctcgcgtcgacctacctgcgcaatccgcagacgatc
gaggtcgcgcgcagcaacgcggccgcgtcgaccgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggccgtcgtcaagctgatccgcgatcgctcgctcaagcaggtg
atcgtgttctgcaacagcaagatcggcgcgagccgcctcgcgcgccagatcgagcgcgac
ggcatcgtcgcggccgcgattcacggggaccgttcgcagagcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaagcgctcgtcgcgaccgacgtcgccgcgcgcggc
ctcgacatcgccgaactgccggccgtcatcaacttcgatctgccgttcaatgcggaagac
tatgtgcaccggatcggccgcaccgggcgcgcgggcgcgtcgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcaactcgccgacatcgagaagctgatcaagcggacactg
tcgctcgaaacgctcgagctcgacctgccgcgccatcgccacgacgagcgcggcggccgc
cgcgaacgcgagcgcgacgagcgccgcggcgcatcggccggccgccgctcggcgggcggc
gagcgcgcgcatcatccgcgccgcgaagcgccgatcgacgatttcttcctgaagccgtac
gtgccgtcgtcgtccgctaaccagccggaagaggcgaagccggcgcagccggagaaaaag
gcgccgaagcagccgctcgccgcgctgctgggcggcttcgggatgccgcgcaagacgtcg
tcttga
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