Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_7480
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Entry
F544_7480 CDS
T03019
Name
(GenBank) DNA-binding protein for site-specific recombination and inversion
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btra03000
]
F544_7480
03036 Chromosome and associated proteins [BR:
btra03036
]
F544_7480
03400 DNA repair and recombination proteins [BR:
btra03400
]
F544_7480
Transcription factors [BR:
btra03000
]
Prokaryotic type
Helix-turn-helix
Other families
F544_7480
Chromosome and associated proteins [BR:
btra03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
F544_7480
DNA repair and recombination proteins [BR:
btra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
F544_7480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_28
HTH_30
Phage_NinH
HTH_23
UPF0175
Motif
Other DBs
NCBI-ProteinID:
AHG85979
UniProt:
W0R492
LinkDB
All DBs
Position
799316..799612
Genome browser
AA seq
98 aa
AA seq
DB search
MLEQQPTQNPLTVSMLNAQAQQVNKPLRDNVKQALKNYLAQLSGEDPTELYELVLCEIEH
PMLDMVMQYTRGNQTRAAAMLGINRGTLRKKLKKYGMG
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacaacaacctacacaaaacccattgacagtatcaatgttgaacgcacaggct
caacaagtaaataagcctctgcgtgataatgtaaaacaagcattaaaaaactatttagcc
caattaagtggtgaagatccaactgagttatatgagttggtgctttgtgaaattgagcat
ccaatgttggatatggtaatgcaatatactcgtggtaaccaaacccgtgcagcagcaatg
cttggtattaaccgcggtacattacgcaaaaaattgaaaaaatatggtatgggttaa
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