Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_7040
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Entry
F543_7040 CDS
T03018
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Pathway
btrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F543_7040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrh03400
]
F543_7040
Enzymes [BR:
btrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
F543_7040
DNA repair and recombination proteins [BR:
btrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F543_7040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AHG83568
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All DBs
Position
671700..672539
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AA seq
279 aa
AA seq
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MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWKAPALKADSIEKFKLFCAVHH
FSADQILPHDSYLINLGNPEAETLEKSRTAFIDEMQRCDQLGLKLLNFHPGAHLNKISEK
ACLSRIAESLNIAIEAVPNVVAVIENTAGQGSNLGYRFEHLAEIIEQVEDKSRVGVCLDT
CHLFSAGYDISSYAKSEQVFTEFANIVGFNYLRGMHLNGSKTPLGSRVDRHDTLRKGTIG
TEVFQFIMQSVDFDGIPMILETIEPEHWADEIQFLRAMV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggtgcccatgtgagtgcttctggtggcgtagaaaatgcggtattacgt
tcggtagagattggggcaaatgcgtttgcactattcactaaaaatcaacgccagtggaaa
gcacctgcattaaaggcggatagtattgaaaaatttaaacttttttgtgctgtacaccat
ttcagcgcggatcagattttgccgcacgatagctatttgattaatttaggcaatcctgag
gcagagacgctagaaaaatcgcgtacagcttttattgatgagatgcaacgatgtgatcaa
ttaggtttaaaattgcttaattttcacccaggagcacatttgaataaaatttcagaaaag
gcgtgtttaagccgtattgctgagtcgttaaatatagcgattgaagccgtacctaatgtc
gttgcagtaattgaaaatacagcagggcaaggctcaaatttgggctaccgatttgagcat
ttggctgaaattattgaacaagtggaagataaaagtcgtgtaggtgtttgcttagatact
tgtcatcttttttcggcaggctacgatattagtagctatgcgaaaagtgagcaagttttt
actgaatttgccaatattgttggatttaactatttacgtggtatgcatctcaatggctct
aaaacaccacttggaagccgagtagatagacacgatacgctacgtaagggcacaattggt
actgaagtcttccaatttatcatgcaatcagtcgattttgatggtattccaatgatttta
gaaaccattgaaccagaacattgggctgatgaaattcagtttttgcgagctatggtataa
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