Bordetella trematum: SAMEA390648700023
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Entry
SAMEA390648700023 CDS
T04322
Symbol
hbpA_1
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
btrm
Bordetella trematum
Pathway
btrm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA390648700023 (hbpA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btrm02000
]
SAMEA390648700023 (hbpA_1)
Transporters [BR:
btrm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SAMEA390648700023 (hbpA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
SAI65985
UniProt:
A0A157Q6M9
LinkDB
All DBs
Position
1:complement(30494..32740)
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AA seq
748 aa
AA seq
DB search
MKTDLMSRRWALCCLCVLLLVAGLSACSRESPINSPYPDGELSENAFFTAFTKRSPRFLD
PASSYSADETPYTYNIYEPLYAYHYLKRPYQLIPRTATKVVEPVYLDAKGEVLPADAPGE
QVAESIYDIDLRDGIRFQPHPAFARKPDGSYAYYPITPGELDGKYNIPDFPLTGSRALTA
DDYVYAIRRLASPRIVSPIYSVMAEHVVGMREYGDRLRERDRALRAGLPPNQRDLPWLDL
READGFTGVQALGPNRLRFRVIGKYPQFKYWLAMTFVAPVAWEVDRFYNQPGMAEHDLSL
NTWPVGTGPYMMVESRTNWRHVLGRNPNYLPRPYPCTGEVGDARLGLLADCGKPTPFIDR
IVFSIEKEALPLNGKFLQGYYDAPQVERGDYGVAMLVAASDSPDKAALFRERGFYLPTTV
ETTNYYMGFNWLDPVVGQGDTPEQAERNRKLRQAISIAFDWEEYVNIFQDGQAQVAHGPV
PPGVLGYEALPAGYNPVVYDLVDGKPRRKSVETARKLLAEAGYPNGRNAKTGAPLVLYYD
AMSGAGASPMFDWMRRQLAKINVQMDVRSTDYNRFQDKMRNGSAQLFLWGWNADYPDAEN
FLFLLYGPNAKAKNGGENAANYNSPEFNALFEQMRFLDDGPQKAELIARMTDVVRRDAVW
MFGYFPMSGGAYQQWVGNAKPSQMVRDSLQYMKVDPGLRVRKTDAWNTPRWWPLGVLALL
ILLVIIPSYRVLRRRERQTAFGTEERKS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagatctcatgtcgaggcgctgggcactgtgctgtctttgcgtcttactgctg
gtggcgggcctgtcggcctgctcgcgcgagtctcccatcaacagtccctaccccgatggc
gaactttcagagaacgctttcttcacggcgttcaccaagcgctctccgcgcttcctggat
ccggccagctcctattccgccgacgaaacgccctatacctataacatctacgaaccgctc
tacgcctatcactacctcaagcggccctaccagctcattccacgcacggccacgaaagtg
gttgagcctgtctacctggatgccaagggcgaggtgttgccggcagacgcgccgggcgaa
caggtcgccgaaagcatctacgacatcgatctgcgcgacggcatccgtttccagccccat
ccggcctttgcccgcaaacccgacggcagctacgcctactatcccatcacgcccggcgag
ctcgacggcaagtacaacatccccgactttcccctgaccggcagccgcgccctgacggcc
gatgactacgtctacgcgatccgtcggctggccagcccgcgcatcgtctcacccatctat
tccgtgatggccgaacacgtcgtcggcatgcgcgagtatggcgaccgtctgcgcgaacgc
gatcgggccctgcgcgccggcctgccgccaaaccagcgcgacctgccctggctcgatctg
cgcgaagccgatggtttcaccggcgtgcaggcccttgggccgaatcgtctgcgtttccgc
gtgatcggcaagtacccccagttcaagtattggctggcgatgaccttcgtggcgcccgtc
gcctgggaggtcgaccgcttctacaaccagcccggcatggccgagcacgacctttccctc
aatacctggcccgtcggcaccggcccctacatgatggtcgagtcgcgcaccaactggcgc
catgtgctggggcgcaaccccaattaccttccacggccctatccctgcaccggcgaagtc
ggcgatgcccggctggggctgctggcagattgcggcaagcccactcctttcatcgatcgc
atcgtcttcagcatcgaaaaagaggcgctgcccctgaacggaaagttcctgcagggttac
tacgatgcgccgcaggtcgagcgcggtgattatggcgtggccatgctggtggccgcatcc
gactcgcccgacaaggcggcgcttttccgcgagcgtggcttctatctgcccaccaccgtg
gaaaccaccaactactacatgggcttcaactggctggatccggtcgtcggccagggcgac
acccccgagcaggccgagcgcaaccgcaagctgcggcaggccatcagtatcgccttcgac
tgggaagagtacgtgaatatcttccaggacggccaggcgcaggtcgcgcatggcccggtg
ccgccgggggtgttgggctacgaagccttgccggccggctacaaccccgtggtctatgac
ctcgtggacggcaagccccggcgcaagtccgtggaaacagcccgcaagctgctggccgaa
gccggctatcccaacggccgcaacgccaagaccggggcgccgctggtgctgtactacgac
gccatgtcgggcgcaggggccagccccatgtttgactggatgcgacgccagctggccaag
atcaatgtccagatggatgtccgctccaccgactacaaccgcttccaggacaagatgcgc
aatggatcggcgcagctctttctctggggctggaacgccgactaccccgatgccgagaac
ttccttttcctgctgtatgggcccaatgccaaggccaagaacggtggcgagaacgccgcc
aactacaacagcccggaattcaacgcgctcttcgagcagatgcgcttcctggatgatggc
ccgcagaaggccgagctcattgcccgcatgaccgatgtcgtgcgtcgcgatgcggtctgg
atgttcggctattttccgatgtctggcggcgcctatcagcaatgggtgggcaacgccaaa
cccagccagatggtgcgagactcgcttcaatacatgaaagtcgatcccggcctgcgggtg
cgcaagaccgatgcctggaacacgccccgctggtggccgctgggcgtgttggcgctgctg
atcctgctggtgatcatcccttcctatcgcgtgttgcgccgccgtgagcgccagacggcc
tttggcaccgaggagcgaaaatcatga
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