Bordetella trematum: SAMEA390648700510
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Entry
SAMEA390648700510 CDS
T04322
Symbol
capD
Name
(GenBank) sugar nucleotide epimerase / oxidoreductase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
btrm
Bordetella trematum
Pathway
btrm00520
Amino sugar and nucleotide sugar metabolism
btrm00541
O-Antigen nucleotide sugar biosynthesis
btrm01100
Metabolic pathways
btrm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
SAMEA390648700510 (capD)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAMEA390648700510 (capD)
Enzymes [BR:
btrm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
SAMEA390648700510 (capD)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
RmlD_sub_bind
NmrA
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Shikimate_DH
DUF5122
Motif
Other DBs
NCBI-ProteinID:
SAI66947
UniProt:
A0A157QTR9
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Position
1:complement(540487..541485)
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AA seq
332 aa
AA seq
DB search
MLQDKTILVTGGTGSFGNTFVPMTLAKYNPKKIIILSRDEMKQWDMAKKFHNDPRVRFFI
GDVRDRERLYRALDGVDYVVHAAATKIVPTAEYNPFECVKTNVDGAMNLIDACIDKGVKR
VVALSTDKASSPINLYGATKLASDKLFVAGNAYSGEHGTRFAVVRYGNVMGSRGSVIPFF
MSIREKGVLPITDPRMTRFMISLEQGVELVWHAFEDMIGGEIYVKKIPSMKVTDLARVLA
PEAKQEVVGIRPGEKLHEQMIGAEDSFHTYEYPEHYKILPAINGWSESPERIKDGKRVAE
GFVYASDNNTEWMTDAQLGEWIDINREKIGSI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagataaaactatcctcgttactggtggcactggctccttcggtaatactttt
gtgcccatgacgctggccaagtacaacccgaagaaaatcatcattttgtcgcgcgacgag
atgaagcagtgggacatggcgaagaagttccacaatgatccgcgtgtgcgtttcttcatc
ggtgacgtgcgcgaccgcgagcgtctgtaccgtgcgctggatggtgttgattatgttgtg
cacgcggctgccaccaagatcgtgccgaccgccgaatacaacccgtttgaatgcgtcaag
accaacgttgacggcgcaatgaatctgatcgatgcgtgcatcgacaagggcgtaaagcgt
gtggtggcgctgtcgaccgacaaggccagcagtcctatcaacctgtacggtgctaccaag
ctggcttctgacaagttgttcgtggccggtaacgcctattcgggtgagcacggcacccgt
tttgctgtggtccggtacggcaatgtgatgggctcgcgcggttcggtcattcccttcttc
atgtctattcgcgaaaagggtgttctgccgatcacagatccgcgtatgacccgcttcatg
atttcgctggagcagggtgtggaattggtgtggcacgcattcgaggacatgatcggcggc
gaaatctacgtcaagaagattccgtcgatgaaggtgaccgacctggcccgcgtgcttgcc
ccggaggccaagcaggaagtggttggcattcgcccgggcgagaagctgcatgagcagatg
atcggcgccgaagattcgttccacacctacgaatacccggagcactacaagattctgccc
gctatcaatggttggtccgagtcgccggagcgtattaaggatggcaagcgagtcgcagag
ggcttcgtctatgccagcgacaacaacactgagtggatgacggatgcccaattgggtgaa
tggattgacatcaaccgcgaaaagatcgggagcatctga
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