Burkholderia ubonensis: BW23_518
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Entry
BW23_518 CDS
T03794
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BW23_518 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_518 (recD)
Enzymes [BR:
bub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BW23_518 (recD)
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BW23_518 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
UvrD-helicase
Viral_helicase1
SH3_13
Helicase_RecD
SLFN-g3_helicase
DEAD
AAA_22
RecD_N
MukB
CbiA
ATPase
Motif
Other DBs
NCBI-ProteinID:
AJX15275
LinkDB
All DBs
Position
I:complement(563440..565656)
Genome browser
AA seq
738 aa
AA seq
DB search
MSTPDDTLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPAAAARWAARAAFAA
SRATAGGHVCVSLGALAQRYDEPLADVRAALAASGVAAFGALERGEERPLIVDRHDRLYL
ARYFAYERRLAEALVAQASAVAADDAPAPDVLRERLARYFGPATGETDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPNTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPSFSAAACARIAQALGIDEAAFVAALPTPADAE
PDAAAAAVAIGRTPVAPPPAGPRQASLFDDEPPAAVATADEAAGDADDADDGPAWIEADE
LAWLDAAALPPLDAGAAQRVAAMIPVAPEDVEAAEAITPAPLADCVVWLERNYRFGLDSP
IGRLSLAIRRGDVQEALDALPASDAAAASFHEDAGDALAATTVERLARRFSAYLDALRDA
LAAAVPDPLPLFDALNRFRILCATRGGARGAEHVNALVAAHVRRAAHVPLAVGAHWFTGR
PIMVTRNDYALGLFNGDIGIALPDAQGVLRVWFKRADGTARAVSPAALPPHETAFALTVH
KSQGSEFDEAALVLPATFGRVLTRELVYTAVTRARTRVQVIGGRRVLAQAIATRTQRDSG
LSARIAEALARRATEASR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcccgacgatacgctcgagttcaccggcggcctcgtcgcgcgcctgcccgag
cccgcggatttcggcatcgcgctcgcggaaggcttcgcgcgccggatcggcgatctcgcg
cgccgcgcgggcgcgccggccgcggcggcgcgctgggccgcgcgcgccgcgttcgcggcc
agccgcgcgaccgcgggcggacacgtgtgcgtgtcgctcggcgcgctcgcgcagcgttac
gacgaaccgctcgccgacgtccgcgcggcgctcgcggcgagcggcgtcgccgcgttcggc
gcactcgagcgcggcgaggagcggccgctgatcgtcgaccggcacgatcgtctctacctc
gcgcgctatttcgcgtacgaacggcggctcgccgaagcgctggtcgcgcaggcgagcgcg
gtggcggctgacgacgcgccggcgcccgacgtgctgcgcgagcgcctcgcccgctacttc
gggccggcgaccggcgaaaccgactggcagcgcgtcgcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcggtcccggcaccggcaagacgaccaccgtcgtcggcgtg
ctcgcatgcctgctcgacgcgcatcccggcctgcgcatcgcgctggccgcgccgaccggc
aaggccgcgcaacggatgcaggaagcgctgcacgcgcgggccggcgacctgccgcccgaa
ctcgccgcgcgcctgccgaacacgtcgtacacgctgcaccgcctgctgggcggcggcggg
gcggcggggttccgtcatcatcgcgacaacccgctgccgtacgacctgatcgtcgtcgac
gaagcgtcgatgatcgacgtcgcgctggccgcgcatctgctcgacgcgctcgcgccgggc
gcgcggctcgtgctgctcggcgacaaggaccagctagccgcggtcgaggcgggcgcggtg
ttcgccgagctgagcgcacggccgtcgttcagcgcagcggcttgcgcgcgcatcgcgcag
gcgctcggcatcgacgaagcggcgttcgtcgcggcgctgccgacgccggccgatgccgag
ccggacgcagccgcggcggcggttgcgatcgggcgcacgccggtcgcgccgcccccggcc
ggcccccgccaggcgtcgctgttcgacgatgagccacccgcggccgtggcgacggccgac
gaagccgcaggcgacgccgacgacgctgacgatgggcccgcatggatcgaggccgacgaa
ctcgcgtggctcgacgcggccgcgttgccgccgctcgatgccggggccgcgcagcgcgtc
gcggcgatgattcccgttgctccggaggacgtcgaggccgctgaagcgatcacaccggcg
ccgctcgcggattgcgtcgtgtggctcgagcgcaattaccgtttcgggctcgattcgccg
atcggccgcctgtcgctggcgatccgccgcggcgacgtgcaggaggcgctcgacgcgctg
ccggcgagcgacgcggccgccgcatcgttccacgaggacgccggcgacgcgctcgccgcg
acgaccgtcgaacgcctcgcgcggcgcttttccgcctatctggacgcgttgcgggatgcg
ctcgccgccgccgtgccggacccgttgccgctgttcgacgcgctcaaccgcttccggatc
ctgtgcgcgacgcgtggcggggcgcgcggcgccgaacacgtcaatgcgctcgtcgcggcg
cacgtgcgccgcgccgcgcacgtgccgctcgcagttggcgcgcactggttcaccgggcgg
ccgatcatggtgacgcgcaacgactatgcgctcgggctgttcaacggcgacatcggcatc
gcgctgcccgacgcgcagggcgtgctgcgcgtgtggttcaagcgggcggacggcaccgcg
cgcgcggtgtcgccggccgcgctgccgccgcacgagaccgcgttcgcgctgaccgttcac
aaatcgcagggctcggaattcgacgaagccgcgctcgtgctgccggcgacgttcggccgc
gtgctgacgcgcgagctggtctacacggcggtgacgcgggcgcgcacgcgcgtgcaggtg
atcggcgggcgccgcgtgctcgcgcaggcgatcgcgacgcgcacgcagcgcgattcgggg
ctgtcggcgcgcatcgccgaggcgctcgcgcggcgcgccacggaggcgtcgcgatga
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