Buttiauxella sp. 3AFRM03: D8682_08285
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Entry
D8682_08285 CDS
T05676
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D8682_08285 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buf03400
]
D8682_08285 (uvrB)
DNA repair and recombination proteins [BR:
buf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D8682_08285 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D8682_08285 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AYN26987
UniProt:
A0A3G2IDA3
LinkDB
All DBs
Position
complement(1430732..1432747)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKAFKLNSAFKPSGDQPEAIRRLEEGLQDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDSSVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLTELQ
YTRNDQAFQRATFRVRGEVIDIFPAESDDLALRVELFDEEVERLSLFDPLTGQIDQVIQR
FTIYPKSHYVTPRERIVQAMEEIKVELADRKKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGVENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPSNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVGTQVDDLLSEIRKRVEINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAISETERRREKQQRYNEENGITPQGLNKKVVDVLQLG
EGMAKTKGRMKSKARSVIEDDEIILTPKALQQKIHQLEAKMLEHAQNLEFEEAAQLRDQL
HELRQLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcattcaaattaaattcagcattcaaaccttctggcgatcagccagaggcc
attcgccgccttgaagaggggctacaagacgggcttgcccatcagacactgttgggtgtg
acaggctccggtaagacctttaccgtggcgaacgtgattgcagatttgcaacgccccacc
atggtgctggcaccgaacaaaacccttgcggcgcagttgtatggcgagatgaaagagttc
tttccggataacgcggttgagttctttgtttcctactacgattactaccagcctgaagcc
tacgtcccgagctccgatacttttatcgaaaaagattcctcggtgaatgaacatatcgag
cagatgcgcctgtcagccaccaaagcgttactcgaaaggcgtgatgtgattgtggtggct
tcggtgtcggcgatatacggcctgggcgatccggatctctacctgaaaatgatgctgcat
ctcaccaaagggatgatcatcgatcagcgctctattttgcgccgtttgaccgaactgcaa
tacacccgtaatgaccaggctttccagcgcgcgactttccgtgtgcgtggggaagtcatc
gacatcttcccggcagagtcagacgatttagcgttacgggtcgaattgtttgatgaagaa
gtggaacggctttcactattcgaccccctgaccgggcaaatagaccaggtgattcagcgc
ttcaccatttaccctaaatcacattacgtcaccccgcgtgaacgtattgtgcaagccatg
gaagaaattaaggtggaactggctgaccgtaaaaaggtcttgctggcgaacaacaaactg
cttgaagagcagcgcctgtcgcaacgtactcaattcgatttagagatgatgaacgaactg
ggctactgctctggggtagaaaactattcgcgcttcctgtcggggcgtggccctggcgag
ccaccaccaacgcttttcgattatctgccagcagatggcctgctggtggtcgacgaatcc
cacgtgactattccgcaaatcggcggcatgtacaaaggtgaccgggcgcgtaaagaaacc
ctggttgaatacggcttccgtctgccatcagcactcgataaccgcccgctgagatttgaa
gagtttgaagccctggctccgcaaaccatctatgtttcggcaacacccagcaattacgag
ctggaaaaatcaggtggtgatgttgtcgatcaggttgtcaggccaacgggtttgctggac
ccgattatcgaagtgcgtccagttggcacccaggttgacgacttgctttccgagattcgt
aaacgtgttgaaatcaacgaacgtgttttggtcaccacgctgaccaaacgtatggccgaa
gatttgacagagtatctggaagagcatggcgagcgggtgcgttatctgcactcagatatc
gataccgtcgagcgtatggagatcattcgtgatttgcgccttggcgagttcgacgtgctg
gtaggcatcaacttgctacgtgaggggttggatatgcctgaagtgtcgctggtggccatt
ctggatgccgataaagaaggtttcctgcgttctgagcgttcgctcattcagaccattggt
cgtgcggcacgtaacatcaacggtaaagccattctatatggtgacaaaatcaccccgtcc
atggcaaaagcgattagtgaaacggagcgtcgccgtgagaaacagcaacgatacaacgaa
gaaaatggcattacgccgcaggggctgaacaagaaagtggtggatgtgctgcagcttggc
gaaggtatggcgaaaaccaaaggccggatgaagagcaaagcgcgcagcgtgattgaagat
gatgaaatcatcctgacgccgaaagccctgcaacagaaaattcatcaactggaagcgaag
atgctggagcatgcgcagaatctggaatttgaagaagctgcacaactccgtgaccagttg
cacgagttacggcaattgtttatcgctgcgtcgtaa
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